Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1DP48730 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1DP48730 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1DP48730 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1DP48730 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1DP48730 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CSNK1DP48730 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.99■□□□□ 0.95
CSNK1DP48730 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.99■□□□□ 0.95
CSNK1DP48730 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.99■□□□□ 0.95
CSNK1DP48730 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1DP48730 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1DP48730 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1DP48730 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1DP48730 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1DP48730 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1DP48730 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.99■□□□□ 0.95
CSNK1DP48730 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.99■□□□□ 0.95
CSNK1DP48730 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.99■□□□□ 0.95
CSNK1DP48730 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1DP48730 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CSNK1DP48730 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.98■□□□□ 0.95
CSNK1DP48730 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1DP48730 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1DP48730 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1DP48730 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.98■□□□□ 0.95
CSNK1DP48730 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.98■□□□□ 0.95
CSNK1DP48730 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.98■□□□□ 0.95
CSNK1DP48730 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.98■□□□□ 0.95
CSNK1DP48730 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.98■□□□□ 0.95
CSNK1DP48730 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1DP48730 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1DP48730 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.98■□□□□ 0.95
CSNK1DP48730 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1DP48730 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.98■□□□□ 0.95
CSNK1DP48730 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1DP48730 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1DP48730 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1DP48730 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1DP48730 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
CSNK1DP48730 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1DP48730 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1DP48730 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1DP48730 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1DP48730 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1DP48730 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1DP48730 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.97■□□□□ 0.95
CSNK1DP48730 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1DP48730 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CSNK1DP48730 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1DP48730 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CSNK1DP48730 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1DP48730 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.97■□□□□ 0.95
CSNK1DP48730 CDV3P1-201ENST00000471403 739 ntBASIC20.97■□□□□ 0.95
CSNK1DP48730 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CSNK1DP48730 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.97■□□□□ 0.95
CSNK1DP48730 AC133552.2-202ENST00000575694 574 ntBASIC20.97■□□□□ 0.95
CSNK1DP48730 FAM21FP-204ENST00000608637 956 ntBASIC20.97■□□□□ 0.95
CSNK1DP48730 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.97■□□□□ 0.95
CSNK1DP48730 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.97■□□□□ 0.95
CSNK1DP48730 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1DP48730 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1DP48730 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.97■□□□□ 0.95
CSNK1DP48730 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CSNK1DP48730 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CSNK1DP48730 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CSNK1DP48730 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK1DP48730 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.96■□□□□ 0.95
CSNK1DP48730 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK1DP48730 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK1DP48730 MIR663A-201ENST00000385250 93 ntBASIC20.96■□□□□ 0.95
CSNK1DP48730 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CSNK1DP48730 AC006970.2-201ENST00000450065 779 ntBASIC20.96■□□□□ 0.95
CSNK1DP48730 AL050303.2-201ENST00000619798 666 ntBASIC20.96■□□□□ 0.95
CSNK1DP48730 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.96■□□□□ 0.95
CSNK1DP48730 OR10C1-204ENST00000622521 1039 ntBASIC20.96■□□□□ 0.95
CSNK1DP48730 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CSNK1DP48730 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CSNK1DP48730 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.96■□□□□ 0.95
CSNK1DP48730 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK1DP48730 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK1DP48730 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK1DP48730 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.96■□□□□ 0.95
CSNK1DP48730 FEM1AP4-201ENST00000443167 1987 ntBASIC20.96■□□□□ 0.95
CSNK1DP48730 AL049796.1-201ENST00000565336 1766 ntBASIC20.95■□□□□ 0.94
CSNK1DP48730 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSNK1DP48730 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.95■□□□□ 0.94
CSNK1DP48730 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSNK1DP48730 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSNK1DP48730 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSNK1DP48730 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
CSNK1DP48730 NCF1B-203ENST00000435988 1254 ntBASIC20.95■□□□□ 0.94
CSNK1DP48730 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.95■□□□□ 0.94
CSNK1DP48730 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.95■□□□□ 0.94
CSNK1DP48730 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSNK1DP48730 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CSNK1DP48730 AL024507.2-201ENST00000606070 2574 ntBASIC20.94■□□□□ 0.94
CSNK1DP48730 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSNK1DP48730 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CSNK1DP48730 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.94■□□□□ 0.94
CSNK1DP48730 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms