Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GABRA4P48169 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GABRA4P48169 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.84■□□□□ 0.77
GABRA4P48169 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GABRA4P48169 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
GABRA4P48169 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.84■□□□□ 0.77
GABRA4P48169 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.84■□□□□ 0.77
GABRA4P48169 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.77
GABRA4P48169 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GABRA4P48169 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GABRA4P48169 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
GABRA4P48169 SLC29A4P1-201ENST00000398760 971 ntBASIC19.83■□□□□ 0.77
GABRA4P48169 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
GABRA4P48169 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GABRA4P48169 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.83■□□□□ 0.77
GABRA4P48169 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
GABRA4P48169 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GABRA4P48169 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GABRA4P48169 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
GABRA4P48169 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
GABRA4P48169 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
GABRA4P48169 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GABRA4P48169 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
GABRA4P48169 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
GABRA4P48169 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GABRA4P48169 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GABRA4P48169 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
GABRA4P48169 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
GABRA4P48169 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
GABRA4P48169 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GABRA4P48169 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.82■□□□□ 0.76
GABRA4P48169 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.82■□□□□ 0.76
GABRA4P48169 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
GABRA4P48169 FAM21FP-204ENST00000608637 956 ntBASIC19.82■□□□□ 0.76
GABRA4P48169 AC008694.1-202ENST00000636953 945 ntBASIC19.82■□□□□ 0.76
GABRA4P48169 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
GABRA4P48169 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GABRA4P48169 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GABRA4P48169 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.82■□□□□ 0.76
GABRA4P48169 MKRN4P-201ENST00000444706 1521 ntBASIC19.81■□□□□ 0.76
GABRA4P48169 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GABRA4P48169 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
GABRA4P48169 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GABRA4P48169 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.81■□□□□ 0.76
GABRA4P48169 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GABRA4P48169 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.81■□□□□ 0.76
GABRA4P48169 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GABRA4P48169 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
GABRA4P48169 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GABRA4P48169 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
GABRA4P48169 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.81■□□□□ 0.76
GABRA4P48169 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.81■□□□□ 0.76
GABRA4P48169 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GABRA4P48169 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GABRA4P48169 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GABRA4P48169 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
GABRA4P48169 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
GABRA4P48169 AC010980.2-201ENST00000587099 1412 ntBASIC19.8■□□□□ 0.76
GABRA4P48169 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.8■□□□□ 0.76
GABRA4P48169 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GABRA4P48169 MIPEPP3-201ENST00000412105 444 ntBASIC19.8■□□□□ 0.76
GABRA4P48169 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.8■□□□□ 0.76
GABRA4P48169 AC073210.2-201ENST00000430369 194 ntBASIC19.8■□□□□ 0.76
GABRA4P48169 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.8■□□□□ 0.76
GABRA4P48169 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.8■□□□□ 0.76
GABRA4P48169 AC098934.4-201ENST00000564127 592 ntBASIC19.8■□□□□ 0.76
GABRA4P48169 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.8■□□□□ 0.76
GABRA4P48169 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.8■□□□□ 0.76
GABRA4P48169 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.8■□□□□ 0.76
GABRA4P48169 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GABRA4P48169 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.79■□□□□ 0.76
GABRA4P48169 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
GABRA4P48169 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.79■□□□□ 0.76
GABRA4P48169 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.79■□□□□ 0.76
GABRA4P48169 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
GABRA4P48169 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
GABRA4P48169 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GABRA4P48169 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.79■□□□□ 0.76
GABRA4P48169 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.79■□□□□ 0.76
GABRA4P48169 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.79■□□□□ 0.76
GABRA4P48169 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.79■□□□□ 0.76
GABRA4P48169 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.79■□□□□ 0.76
GABRA4P48169 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.79■□□□□ 0.76
GABRA4P48169 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GABRA4P48169 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
GABRA4P48169 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.79■□□□□ 0.76
GABRA4P48169 FBXW4P1-201ENST00000426721 2239 ntBASIC19.79■□□□□ 0.76
GABRA4P48169 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GABRA4P48169 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
GABRA4P48169 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GABRA4P48169 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GABRA4P48169 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GABRA4P48169 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.78■□□□□ 0.76
GABRA4P48169 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.78■□□□□ 0.76
GABRA4P48169 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.78■□□□□ 0.76
GABRA4P48169 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GABRA4P48169 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GABRA4P48169 AC069152.1-201ENST00000438030 544 ntBASIC19.78■□□□□ 0.76
GABRA4P48169 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.78■□□□□ 0.76
GABRA4P48169 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms