Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFC3P40938 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.06■□□□□ 0.64
RFC3P40938 CD99P1-205ENST00000527459 561 ntBASIC19.06■□□□□ 0.64
RFC3P40938 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
RFC3P40938 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.06■□□□□ 0.64
RFC3P40938 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFC3P40938 AC242852.2-201ENST00000615738 1807 ntBASIC19.06■□□□□ 0.64
RFC3P40938 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFC3P40938 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
RFC3P40938 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFC3P40938 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFC3P40938 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFC3P40938 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFC3P40938 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFC3P40938 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.05■□□□□ 0.64
RFC3P40938 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFC3P40938 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFC3P40938 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.05■□□□□ 0.64
RFC3P40938 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFC3P40938 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFC3P40938 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.05■□□□□ 0.64
RFC3P40938 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.05■□□□□ 0.64
RFC3P40938 AC069236.1-201ENST00000604339 616 ntBASIC19.05■□□□□ 0.64
RFC3P40938 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.05■□□□□ 0.64
RFC3P40938 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFC3P40938 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RFC3P40938 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFC3P40938 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFC3P40938 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RFC3P40938 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RFC3P40938 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFC3P40938 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFC3P40938 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RFC3P40938 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC3P40938 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.04■□□□□ 0.64
RFC3P40938 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC3P40938 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.04■□□□□ 0.64
RFC3P40938 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RFC3P40938 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC3P40938 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC3P40938 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC3P40938 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.04■□□□□ 0.64
RFC3P40938 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.04■□□□□ 0.64
RFC3P40938 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.04■□□□□ 0.64
RFC3P40938 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RFC3P40938 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.04■□□□□ 0.64
RFC3P40938 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.04■□□□□ 0.64
RFC3P40938 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.04■□□□□ 0.64
RFC3P40938 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.04■□□□□ 0.64
RFC3P40938 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RFC3P40938 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC3P40938 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC3P40938 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC3P40938 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC3P40938 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC3P40938 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC3P40938 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC3P40938 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.04■□□□□ 0.64
RFC3P40938 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC3P40938 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC3P40938 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.04■□□□□ 0.64
RFC3P40938 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.03■□□□□ 0.64
RFC3P40938 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC3P40938 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RFC3P40938 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RFC3P40938 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC3P40938 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC3P40938 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC3P40938 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RFC3P40938 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RFC3P40938 AC069152.1-201ENST00000438030 544 ntBASIC19.03■□□□□ 0.64
RFC3P40938 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.03■□□□□ 0.64
RFC3P40938 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC3P40938 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RFC3P40938 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC3P40938 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC3P40938 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
RFC3P40938 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RFC3P40938 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC3P40938 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RFC3P40938 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
RFC3P40938 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RFC3P40938 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFC3P40938 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.02■□□□□ 0.64
RFC3P40938 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.02■□□□□ 0.64
RFC3P40938 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RFC3P40938 ABHD17AP1-201ENST00000358206 933 ntBASIC19.02■□□□□ 0.64
RFC3P40938 MIPEPP3-201ENST00000412105 444 ntBASIC19.02■□□□□ 0.64
RFC3P40938 KRT18P6-201ENST00000555540 1265 ntBASIC19.02■□□□□ 0.64
RFC3P40938 AL591742.1-201ENST00000604433 565 ntBASIC19.02■□□□□ 0.64
RFC3P40938 OR10C1-204ENST00000622521 1039 ntBASIC19.02■□□□□ 0.64
RFC3P40938 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.02■□□□□ 0.64
RFC3P40938 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.02■□□□□ 0.64
RFC3P40938 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFC3P40938 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFC3P40938 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RFC3P40938 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RFC3P40938 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RFC3P40938 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RFC3P40938 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms