Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFC5P40937 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
RFC5P40937 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFC5P40937 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.07■■□□□ 1.28
RFC5P40937 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RFC5P40937 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
RFC5P40937 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFC5P40937 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFC5P40937 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFC5P40937 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFC5P40937 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFC5P40937 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFC5P40937 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFC5P40937 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
RFC5P40937 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.06■■□□□ 1.28
RFC5P40937 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.06■■□□□ 1.28
RFC5P40937 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFC5P40937 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RFC5P40937 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.06■■□□□ 1.28
RFC5P40937 SLC29A4P1-201ENST00000398760 971 ntBASIC23.06■■□□□ 1.28
RFC5P40937 AL512625.2-201ENST00000417533 625 ntBASIC23.06■■□□□ 1.28
RFC5P40937 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RFC5P40937 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
RFC5P40937 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.06■■□□□ 1.28
RFC5P40937 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFC5P40937 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
RFC5P40937 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RFC5P40937 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFC5P40937 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RFC5P40937 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RFC5P40937 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFC5P40937 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFC5P40937 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFC5P40937 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
RFC5P40937 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.05■■□□□ 1.28
RFC5P40937 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RFC5P40937 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFC5P40937 CDV3P1-201ENST00000471403 739 ntBASIC23.05■■□□□ 1.28
RFC5P40937 RARRES2P4-201ENST00000514074 484 ntBASIC23.05■■□□□ 1.28
RFC5P40937 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.05■■□□□ 1.28
RFC5P40937 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.05■■□□□ 1.28
RFC5P40937 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.05■■□□□ 1.28
RFC5P40937 AC016405.3-201ENST00000607710 860 ntBASIC23.05■■□□□ 1.28
RFC5P40937 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.05■■□□□ 1.28
RFC5P40937 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFC5P40937 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
RFC5P40937 FBXW4P1-201ENST00000426721 2239 ntBASIC23.05■■□□□ 1.28
RFC5P40937 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFC5P40937 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFC5P40937 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.05■■□□□ 1.28
RFC5P40937 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
RFC5P40937 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.04■■□□□ 1.28
RFC5P40937 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RFC5P40937 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
RFC5P40937 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.04■■□□□ 1.28
RFC5P40937 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
RFC5P40937 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
RFC5P40937 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.04■■□□□ 1.28
RFC5P40937 FAM21FP-204ENST00000608637 956 ntBASIC23.04■■□□□ 1.28
RFC5P40937 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.04■■□□□ 1.28
RFC5P40937 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RFC5P40937 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RFC5P40937 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RFC5P40937 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFC5P40937 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFC5P40937 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFC5P40937 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFC5P40937 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFC5P40937 AL355802.2-201ENST00000402069 882 ntBASIC23.03■■□□□ 1.28
RFC5P40937 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFC5P40937 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.03■■□□□ 1.28
RFC5P40937 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.03■■□□□ 1.28
RFC5P40937 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.03■■□□□ 1.28
RFC5P40937 AC142086.2-201ENST00000569753 217 ntBASIC23.03■■□□□ 1.28
RFC5P40937 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
RFC5P40937 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFC5P40937 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFC5P40937 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
RFC5P40937 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.02■■□□□ 1.28
RFC5P40937 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RFC5P40937 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RFC5P40937 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RFC5P40937 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RFC5P40937 AC093787.1-201ENST00000450396 207 ntBASIC23.02■■□□□ 1.28
RFC5P40937 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.02■■□□□ 1.28
RFC5P40937 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
RFC5P40937 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RFC5P40937 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RFC5P40937 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.02■■□□□ 1.28
RFC5P40937 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RFC5P40937 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RFC5P40937 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
RFC5P40937 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RFC5P40937 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
RFC5P40937 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.01■■□□□ 1.27
RFC5P40937 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
RFC5P40937 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC23.01■■□□□ 1.27
RFC5P40937 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
RFC5P40937 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.01■■□□□ 1.27
RFC5P40937 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms