Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.27■□□□□ 0.67
LCN1P31025 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LCN1P31025 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCN1P31025 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCN1P31025 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCN1P31025 AC026310.3-201ENST00000625186 2373 ntBASIC19.26■□□□□ 0.67
LCN1P31025 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LCN1P31025 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LCN1P31025 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCN1P31025 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCN1P31025 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCN1P31025 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LCN1P31025 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.26■□□□□ 0.67
LCN1P31025 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.26■□□□□ 0.67
LCN1P31025 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCN1P31025 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.26■□□□□ 0.67
LCN1P31025 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.26■□□□□ 0.67
LCN1P31025 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LCN1P31025 AC087623.3-201ENST00000607047 1098 ntBASIC19.26■□□□□ 0.67
LCN1P31025 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
LCN1P31025 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCN1P31025 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCN1P31025 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.26■□□□□ 0.67
LCN1P31025 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCN1P31025 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.26■□□□□ 0.67
LCN1P31025 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LCN1P31025 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCN1P31025 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
LCN1P31025 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LCN1P31025 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LCN1P31025 FEM1AP4-201ENST00000443167 1987 ntBASIC19.25■□□□□ 0.67
LCN1P31025 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LCN1P31025 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LCN1P31025 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LCN1P31025 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LCN1P31025 NTF6G-201ENST00000591094 616 ntBASIC19.25■□□□□ 0.67
LCN1P31025 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LCN1P31025 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LCN1P31025 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.25■□□□□ 0.67
LCN1P31025 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LCN1P31025 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LCN1P31025 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.24■□□□□ 0.67
LCN1P31025 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LCN1P31025 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LCN1P31025 AC061975.6-201ENST00000579045 1553 ntBASIC19.24■□□□□ 0.67
LCN1P31025 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LCN1P31025 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
LCN1P31025 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LCN1P31025 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LCN1P31025 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LCN1P31025 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.24■□□□□ 0.67
LCN1P31025 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
LCN1P31025 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LCN1P31025 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LCN1P31025 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.24■□□□□ 0.67
LCN1P31025 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LCN1P31025 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LCN1P31025 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LCN1P31025 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LCN1P31025 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LCN1P31025 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LCN1P31025 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LCN1P31025 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LCN1P31025 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LCN1P31025 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LCN1P31025 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LCN1P31025 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCN1P31025 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LCN1P31025 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCN1P31025 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.23■□□□□ 0.67
LCN1P31025 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.23■□□□□ 0.67
LCN1P31025 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LCN1P31025 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
LCN1P31025 AL049796.1-201ENST00000565336 1766 ntBASIC19.23■□□□□ 0.67
LCN1P31025 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCN1P31025 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LCN1P31025 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCN1P31025 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LCN1P31025 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LCN1P31025 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LCN1P31025 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
LCN1P31025 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.22■□□□□ 0.67
LCN1P31025 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
LCN1P31025 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LCN1P31025 MIR5787-201ENST00000611784 55 ntBASIC19.22■□□□□ 0.67
LCN1P31025 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
LCN1P31025 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LCN1P31025 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LCN1P31025 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LCN1P31025 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LCN1P31025 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
LCN1P31025 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LCN1P31025 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
LCN1P31025 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LCN1P31025 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.21■□□□□ 0.67
LCN1P31025 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LCN1P31025 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LCN1P31025 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.21■□□□□ 0.67
LCN1P31025 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.21■□□□□ 0.67
LCN1P31025 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms