Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR4A1P22736 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NR4A1P22736 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR4A1P22736 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.23■□□□□ 0.67
NR4A1P22736 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.23■□□□□ 0.67
NR4A1P22736 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NR4A1P22736 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.23■□□□□ 0.67
NR4A1P22736 EDA-201ENST00000338901 1233 ntBASIC19.23■□□□□ 0.67
NR4A1P22736 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.23■□□□□ 0.67
NR4A1P22736 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.23■□□□□ 0.67
NR4A1P22736 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NR4A1P22736 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR4A1P22736 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR4A1P22736 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR4A1P22736 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NR4A1P22736 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR4A1P22736 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR4A1P22736 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR4A1P22736 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.23■□□□□ 0.67
NR4A1P22736 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR4A1P22736 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NR4A1P22736 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NR4A1P22736 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NR4A1P22736 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NR4A1P22736 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR4A1P22736 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
NR4A1P22736 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR4A1P22736 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.22■□□□□ 0.67
NR4A1P22736 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR4A1P22736 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NR4A1P22736 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.22■□□□□ 0.67
NR4A1P22736 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NR4A1P22736 MIR4767-201ENST00000582827 78 ntBASIC19.22■□□□□ 0.67
NR4A1P22736 AL499627.2-201ENST00000606283 725 ntBASIC19.22■□□□□ 0.67
NR4A1P22736 AC136469.2-201ENST00000623944 1028 ntBASIC19.22■□□□□ 0.67
NR4A1P22736 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.22■□□□□ 0.67
NR4A1P22736 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.22■□□□□ 0.67
NR4A1P22736 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
NR4A1P22736 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR4A1P22736 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR4A1P22736 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.22■□□□□ 0.67
NR4A1P22736 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.22■□□□□ 0.67
NR4A1P22736 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR4A1P22736 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NR4A1P22736 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.21■□□□□ 0.67
NR4A1P22736 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NR4A1P22736 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.21■□□□□ 0.67
NR4A1P22736 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NR4A1P22736 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NR4A1P22736 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.21■□□□□ 0.67
NR4A1P22736 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NR4A1P22736 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.21■□□□□ 0.67
NR4A1P22736 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.21■□□□□ 0.67
NR4A1P22736 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NR4A1P22736 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NR4A1P22736 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NR4A1P22736 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.21■□□□□ 0.67
NR4A1P22736 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.21■□□□□ 0.67
NR4A1P22736 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NR4A1P22736 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NR4A1P22736 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
NR4A1P22736 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NR4A1P22736 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NR4A1P22736 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NR4A1P22736 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NR4A1P22736 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.2■□□□□ 0.66
NR4A1P22736 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NR4A1P22736 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.2■□□□□ 0.66
NR4A1P22736 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.2■□□□□ 0.66
NR4A1P22736 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
NR4A1P22736 AL355001.2-201ENST00000620617 1191 ntBASIC19.2■□□□□ 0.66
NR4A1P22736 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NR4A1P22736 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
NR4A1P22736 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.2■□□□□ 0.66
NR4A1P22736 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NR4A1P22736 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.2■□□□□ 0.66
NR4A1P22736 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.2■□□□□ 0.66
NR4A1P22736 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.2■□□□□ 0.66
NR4A1P22736 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
NR4A1P22736 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NR4A1P22736 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
NR4A1P22736 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NR4A1P22736 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NR4A1P22736 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NR4A1P22736 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NR4A1P22736 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NR4A1P22736 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NR4A1P22736 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.19■□□□□ 0.66
NR4A1P22736 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NR4A1P22736 AC073314.1-201ENST00000568729 2216 ntBASIC19.19■□□□□ 0.66
NR4A1P22736 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
NR4A1P22736 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NR4A1P22736 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NR4A1P22736 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.19■□□□□ 0.66
NR4A1P22736 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.19■□□□□ 0.66
NR4A1P22736 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NR4A1P22736 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NR4A1P22736 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NR4A1P22736 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NR4A1P22736 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms