Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
ERCC2P18074 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
ERCC2P18074 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ERCC2P18074 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
ERCC2P18074 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ERCC2P18074 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.46■■□□□ 1.03
ERCC2P18074 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ERCC2P18074 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ERCC2P18074 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ERCC2P18074 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ERCC2P18074 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
ERCC2P18074 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.46■■□□□ 1.03
ERCC2P18074 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.46■■□□□ 1.03
ERCC2P18074 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.46■■□□□ 1.03
ERCC2P18074 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.46■■□□□ 1.03
ERCC2P18074 RARRES2P11-201ENST00000635158 484 ntBASIC21.46■■□□□ 1.03
ERCC2P18074 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ERCC2P18074 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
ERCC2P18074 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ERCC2P18074 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.46■■□□□ 1.03
ERCC2P18074 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.46■■□□□ 1.03
ERCC2P18074 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ERCC2P18074 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.46■■□□□ 1.03
ERCC2P18074 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
ERCC2P18074 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
ERCC2P18074 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.45■■□□□ 1.02
ERCC2P18074 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ERCC2P18074 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
ERCC2P18074 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ERCC2P18074 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ERCC2P18074 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ERCC2P18074 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.45■■□□□ 1.02
ERCC2P18074 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.45■■□□□ 1.02
ERCC2P18074 SLC7A5P1-201ENST00000568957 537 ntBASIC21.45■■□□□ 1.02
ERCC2P18074 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.45■■□□□ 1.02
ERCC2P18074 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.45■■□□□ 1.02
ERCC2P18074 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ERCC2P18074 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
ERCC2P18074 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.44■■□□□ 1.02
ERCC2P18074 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
ERCC2P18074 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ERCC2P18074 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.44■■□□□ 1.02
ERCC2P18074 AC137761.2-201ENST00000561729 223 ntBASIC21.44■■□□□ 1.02
ERCC2P18074 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.44■■□□□ 1.02
ERCC2P18074 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.44■■□□□ 1.02
ERCC2P18074 AC145350.3-201ENST00000569033 163 ntBASIC21.44■■□□□ 1.02
ERCC2P18074 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.44■■□□□ 1.02
ERCC2P18074 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ERCC2P18074 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ERCC2P18074 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
ERCC2P18074 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
ERCC2P18074 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ERCC2P18074 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
ERCC2P18074 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ERCC2P18074 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.43■■□□□ 1.02
ERCC2P18074 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
ERCC2P18074 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.43■■□□□ 1.02
ERCC2P18074 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ERCC2P18074 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ERCC2P18074 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.43■■□□□ 1.02
ERCC2P18074 MYCNOS-205ENST00000641950 531 ntBASIC21.43■■□□□ 1.02
ERCC2P18074 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ERCC2P18074 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ERCC2P18074 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.43■■□□□ 1.02
ERCC2P18074 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
ERCC2P18074 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ERCC2P18074 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.43■■□□□ 1.02
ERCC2P18074 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ERCC2P18074 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ERCC2P18074 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
ERCC2P18074 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.43■■□□□ 1.02
ERCC2P18074 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
ERCC2P18074 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ERCC2P18074 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ERCC2P18074 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ERCC2P18074 AC245052.3-201ENST00000450182 901 ntBASIC21.42■■□□□ 1.02
ERCC2P18074 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ERCC2P18074 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.42■■□□□ 1.02
ERCC2P18074 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.42■■□□□ 1.02
ERCC2P18074 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.42■■□□□ 1.02
ERCC2P18074 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ERCC2P18074 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ERCC2P18074 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ERCC2P18074 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ERCC2P18074 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ERCC2P18074 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ERCC2P18074 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
ERCC2P18074 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ERCC2P18074 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ERCC2P18074 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ERCC2P18074 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.41■■□□□ 1.02
ERCC2P18074 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.41■■□□□ 1.02
ERCC2P18074 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ERCC2P18074 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.41■■□□□ 1.02
ERCC2P18074 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ERCC2P18074 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ERCC2P18074 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
ERCC2P18074 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ERCC2P18074 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.41■■□□□ 1.02
ERCC2P18074 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms