Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
THRAP10827 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
THRAP10827 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
THRAP10827 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
THRAP10827 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.84■□□□□ 0.93
THRAP10827 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
THRAP10827 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.84■□□□□ 0.93
THRAP10827 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
THRAP10827 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
THRAP10827 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
THRAP10827 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
THRAP10827 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
THRAP10827 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
THRAP10827 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.83■□□□□ 0.93
THRAP10827 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
THRAP10827 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
THRAP10827 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
THRAP10827 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
THRAP10827 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
THRAP10827 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
THRAP10827 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
THRAP10827 AC079140.4-201ENST00000507448 529 ntBASIC20.83■□□□□ 0.93
THRAP10827 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.83■□□□□ 0.93
THRAP10827 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
THRAP10827 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
THRAP10827 AL157384.1-201ENST00000445995 2473 ntBASIC20.83■□□□□ 0.92
THRAP10827 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
THRAP10827 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
THRAP10827 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.83■□□□□ 0.92
THRAP10827 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
THRAP10827 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.83■□□□□ 0.92
THRAP10827 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
THRAP10827 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
THRAP10827 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
THRAP10827 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
THRAP10827 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
THRAP10827 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
THRAP10827 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
THRAP10827 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
THRAP10827 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
THRAP10827 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
THRAP10827 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
THRAP10827 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
THRAP10827 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.82■□□□□ 0.92
THRAP10827 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
THRAP10827 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
THRAP10827 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
THRAP10827 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
THRAP10827 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
THRAP10827 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.81■□□□□ 0.92
THRAP10827 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
THRAP10827 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
THRAP10827 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
THRAP10827 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
THRAP10827 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
THRAP10827 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
THRAP10827 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.81■□□□□ 0.92
THRAP10827 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.81■□□□□ 0.92
THRAP10827 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.81■□□□□ 0.92
THRAP10827 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.81■□□□□ 0.92
THRAP10827 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
THRAP10827 AC092667.1-201ENST00000434301 2586 ntBASIC20.81■□□□□ 0.92
THRAP10827 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
THRAP10827 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
THRAP10827 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
THRAP10827 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
THRAP10827 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
THRAP10827 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
THRAP10827 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
THRAP10827 CDCA4P2-201ENST00000441182 718 ntBASIC20.8■□□□□ 0.92
THRAP10827 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.8■□□□□ 0.92
THRAP10827 RAP2CP1-201ENST00000605103 478 ntBASIC20.8■□□□□ 0.92
THRAP10827 BID-214ENST00000617586 542 ntTSL 5 BASIC20.8■□□□□ 0.92
THRAP10827 AC073111.5-205ENST00000641717 521 ntBASIC20.8■□□□□ 0.92
THRAP10827 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
THRAP10827 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
THRAP10827 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
THRAP10827 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
THRAP10827 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.8■□□□□ 0.92
THRAP10827 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.8■□□□□ 0.92
THRAP10827 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.8■□□□□ 0.92
THRAP10827 AC005224.4-201ENST00000583262 1652 ntBASIC20.8■□□□□ 0.92
THRAP10827 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
THRAP10827 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
THRAP10827 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
THRAP10827 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
THRAP10827 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.79■□□□□ 0.92
THRAP10827 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.79■□□□□ 0.92
THRAP10827 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.79■□□□□ 0.92
THRAP10827 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.79■□□□□ 0.92
THRAP10827 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
THRAP10827 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
THRAP10827 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.79■□□□□ 0.92
THRAP10827 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
THRAP10827 AC009237.3-201ENST00000393279 1427 ntBASIC20.78■□□□□ 0.92
THRAP10827 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
THRAP10827 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.78■□□□□ 0.92
THRAP10827 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
THRAP10827 RNF165-205ENST00000588679 2904 ntBASIC20.78■□□□□ 0.92
THRAP10827 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms