Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HNRNPCL4P0DMR1 AC142381.2-201ENST00000566120 298 ntBASIC19.35■□□□□ 0.69
HNRNPCL4P0DMR1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HNRNPCL4P0DMR1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HNRNPCL4P0DMR1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HNRNPCL4P0DMR1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HNRNPCL4P0DMR1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HNRNPCL4P0DMR1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HNRNPCL4P0DMR1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HNRNPCL4P0DMR1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HNRNPCL4P0DMR1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HNRNPCL4P0DMR1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HNRNPCL4P0DMR1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HNRNPCL4P0DMR1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.34■□□□□ 0.69
HNRNPCL4P0DMR1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HNRNPCL4P0DMR1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HNRNPCL4P0DMR1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
HNRNPCL4P0DMR1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HNRNPCL4P0DMR1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HNRNPCL4P0DMR1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.34■□□□□ 0.69
HNRNPCL4P0DMR1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.34■□□□□ 0.69
HNRNPCL4P0DMR1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HNRNPCL4P0DMR1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HNRNPCL4P0DMR1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
HNRNPCL4P0DMR1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HNRNPCL4P0DMR1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
HNRNPCL4P0DMR1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HNRNPCL4P0DMR1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.33■□□□□ 0.69
HNRNPCL4P0DMR1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HNRNPCL4P0DMR1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HNRNPCL4P0DMR1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
HNRNPCL4P0DMR1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HNRNPCL4P0DMR1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.33■□□□□ 0.68
HNRNPCL4P0DMR1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
HNRNPCL4P0DMR1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HNRNPCL4P0DMR1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HNRNPCL4P0DMR1 AL157384.1-201ENST00000445995 2473 ntBASIC19.33■□□□□ 0.68
HNRNPCL4P0DMR1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.33■□□□□ 0.68
HNRNPCL4P0DMR1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HNRNPCL4P0DMR1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
HNRNPCL4P0DMR1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HNRNPCL4P0DMR1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HNRNPCL4P0DMR1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HNRNPCL4P0DMR1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HNRNPCL4P0DMR1 FEM1AP1-201ENST00000431297 1995 ntBASIC19.32■□□□□ 0.68
HNRNPCL4P0DMR1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HNRNPCL4P0DMR1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HNRNPCL4P0DMR1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HNRNPCL4P0DMR1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HNRNPCL4P0DMR1 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.32■□□□□ 0.68
HNRNPCL4P0DMR1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.32■□□□□ 0.68
HNRNPCL4P0DMR1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HNRNPCL4P0DMR1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.32■□□□□ 0.68
HNRNPCL4P0DMR1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HNRNPCL4P0DMR1 AP004607.4-201ENST00000530158 1459 ntBASIC19.32■□□□□ 0.68
HNRNPCL4P0DMR1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HNRNPCL4P0DMR1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HNRNPCL4P0DMR1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.32■□□□□ 0.68
HNRNPCL4P0DMR1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HNRNPCL4P0DMR1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HNRNPCL4P0DMR1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.32■□□□□ 0.68
HNRNPCL4P0DMR1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HNRNPCL4P0DMR1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
HNRNPCL4P0DMR1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HNRNPCL4P0DMR1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HNRNPCL4P0DMR1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HNRNPCL4P0DMR1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HNRNPCL4P0DMR1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HNRNPCL4P0DMR1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.31■□□□□ 0.68
HNRNPCL4P0DMR1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.31■□□□□ 0.68
HNRNPCL4P0DMR1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HNRNPCL4P0DMR1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
HNRNPCL4P0DMR1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HNRNPCL4P0DMR1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HNRNPCL4P0DMR1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HNRNPCL4P0DMR1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
HNRNPCL4P0DMR1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
HNRNPCL4P0DMR1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.3■□□□□ 0.68
HNRNPCL4P0DMR1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HNRNPCL4P0DMR1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HNRNPCL4P0DMR1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
HNRNPCL4P0DMR1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HNRNPCL4P0DMR1 IRS3P-201ENST00000223076 1006 ntBASIC19.3■□□□□ 0.68
HNRNPCL4P0DMR1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HNRNPCL4P0DMR1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HNRNPCL4P0DMR1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.3■□□□□ 0.68
HNRNPCL4P0DMR1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.3■□□□□ 0.68
HNRNPCL4P0DMR1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.3■□□□□ 0.68
HNRNPCL4P0DMR1 AC005837.3-201ENST00000612163 286 ntBASIC19.3■□□□□ 0.68
HNRNPCL4P0DMR1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.3■□□□□ 0.68
HNRNPCL4P0DMR1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HNRNPCL4P0DMR1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HNRNPCL4P0DMR1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HNRNPCL4P0DMR1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.3■□□□□ 0.68
HNRNPCL4P0DMR1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HNRNPCL4P0DMR1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.29■□□□□ 0.68
HNRNPCL4P0DMR1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.29■□□□□ 0.68
HNRNPCL4P0DMR1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HNRNPCL4P0DMR1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
HNRNPCL4P0DMR1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms