Protein–RNA interactions for Protein: P0C0X0

RPS28B, 40S ribosomal protein S28-B, yeastyeast

Known RBP Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS28BP0C0X0 CDC26YFR036W 375 nt1.63□□□□□ -2.15
RPS28BP0C0X0 YIL029W-AYIL029W-A 372 nt1.63□□□□□ -2.15
RPS28BP0C0X0 YOL107WYOL107W 1029 nt1.63□□□□□ -2.15
RPS28BP0C0X0 DSE1YER124C 1722 nt1.63□□□□□ -2.15
RPS28BP0C0X0 NOP12YOL041C 1380 nt1.62□□□□□ -2.15
RPS28BP0C0X0 YDR124WYDR124W 975 nt1.62□□□□□ -2.15
RPS28BP0C0X0 tL(UAA)B1tL(UAA)B1 84 nt1.62□□□□□ -2.15
RPS28BP0C0X0 tL(UAA)B2tL(UAA)B2 84 nt1.62□□□□□ -2.15
RPS28BP0C0X0 tL(UAA)DtL(UAA)D 84 nt1.62□□□□□ -2.15
RPS28BP0C0X0 SUP51tL(UAA)J 84 nt1.62□□□□□ -2.15
RPS28BP0C0X0 tL(UAA)KtL(UAA)K 84 nt1.62□□□□□ -2.15
RPS28BP0C0X0 tL(UAA)LtL(UAA)L 84 nt1.62□□□□□ -2.15
RPS28BP0C0X0 tL(UAA)NtL(UAA)N 84 nt1.62□□□□□ -2.15
RPS28BP0C0X0 PCL7YIL050W 858 nt1.62□□□□□ -2.15
RPS28BP0C0X0 ATG33YLR356W 594 nt1.62□□□□□ -2.15
RPS28BP0C0X0 YLR379WYLR379W 375 nt1.62□□□□□ -2.15
RPS28BP0C0X0 PAU19YMR325W 375 nt1.62□□□□□ -2.15
RPS28BP0C0X0 YPR145C-AYPR145C-A 237 nt1.62□□□□□ -2.15
RPS28BP0C0X0 GRX1YCL035C 333 nt1.62□□□□□ -2.15
RPS28BP0C0X0 HCS1YKL017C 2052 nt1.62□□□□□ -2.15
RPS28BP0C0X0 PKH3YDR466W 2697 nt1.62□□□□□ -2.15
RPS28BP0C0X0 GCN2YDR283C 4980 nt1.61□□□□□ -2.15
RPS28BP0C0X0 SPP41YDR464W 4308 nt1.61□□□□□ -2.15
RPS28BP0C0X0 TAE2YPL009C 3117 nt1.61□□□□□ -2.15
RPS28BP0C0X0 SAS4YDR181C 1446 nt1.61□□□□□ -2.15
RPS28BP0C0X0 YDL186WYDL186W 834 nt1.61□□□□□ -2.15
RPS28BP0C0X0 UBC5YDR059C 447 nt1.61□□□□□ -2.15
RPS28BP0C0X0 YEA4YEL004W 1029 nt1.61□□□□□ -2.15
RPS28BP0C0X0 SPT15YER148W 723 nt1.61□□□□□ -2.15
RPS28BP0C0X0 YAL034C-BYAL034C-B 354 nt1.61□□□□□ -2.15
RPS28BP0C0X0 UTP11YKL099C 753 nt1.61□□□□□ -2.15
RPS28BP0C0X0 GOT1YMR292W 417 nt1.61□□□□□ -2.15
RPS28BP0C0X0 YOR283WYOR283W 693 nt1.61□□□□□ -2.15
RPS28BP0C0X0 GPI2YPL076W 843 nt1.61□□□□□ -2.15
RPS28BP0C0X0 MGR2YPL098C 342 nt1.61□□□□□ -2.15
RPS28BP0C0X0 SST2YLR452C 2097 nt1.61□□□□□ -2.15
RPS28BP0C0X0 HER1YOR227W 3741 nt1.61□□□□□ -2.15
RPS28BP0C0X0 CDC37YDR168W 1521 nt1.61□□□□□ -2.15
RPS28BP0C0X0 SSF1YHR066W 1362 nt1.6□□□□□ -2.15
RPS28BP0C0X0 PUF3YLL013C 2640 nt1.6□□□□□ -2.15
RPS28BP0C0X0 AYT1YLL063C 1425 nt1.6□□□□□ -2.15
RPS28BP0C0X0 YIL166CYIL166C 1629 nt1.6□□□□□ -2.15
RPS28BP0C0X0 snR57snR57 88 nt1.6□□□□□ -2.15
RPS28BP0C0X0 CBS2YDR197W 1170 nt1.6□□□□□ -2.15
RPS28BP0C0X0 PXR1YGR280C 816 nt1.6□□□□□ -2.15
RPS28BP0C0X0 YIL102C-AYIL102C-A 228 nt1.6□□□□□ -2.15
RPS28BP0C0X0 ATG10YLL042C 504 nt1.6□□□□□ -2.15
RPS28BP0C0X0 ARR2YPR200C 393 nt1.6□□□□□ -2.15
RPS28BP0C0X0 MED8YBR193C 672 nt1.6□□□□□ -2.15
RPS28BP0C0X0 RRP6YOR001W 2202 nt1.6□□□□□ -2.15
RPS28BP0C0X0 AI4Q0065 1671 nt1.6□□□□□ -2.15
RPS28BP0C0X0 TOR2YKL203C 7425 nt1.6□□□□□ -2.15
RPS28BP0C0X0 YIL082W-AYIL082W-A 4497 nt1.59□□□□□ -2.15
RPS28BP0C0X0 MES1YGR264C 2256 nt1.59□□□□□ -2.15
RPS28BP0C0X0 YDR290WYDR290W 330 nt1.59□□□□□ -2.15
RPS28BP0C0X0 JAC1YGL018C 555 nt1.59□□□□□ -2.15
RPS28BP0C0X0 YGL118CYGL118C 438 nt1.59□□□□□ -2.15
RPS28BP0C0X0 YHL045WYHL045W 348 nt1.59□□□□□ -2.15
RPS28BP0C0X0 YHR182C-AYHR182C-A 474 nt1.59□□□□□ -2.15
RPS28BP0C0X0 YJR020WYJR020W 333 nt1.59□□□□□ -2.15
RPS28BP0C0X0 YKR075W-AYKR075W-A 270 nt1.59□□□□□ -2.15
RPS28BP0C0X0 YLR361C-AYLR361C-A 297 nt1.59□□□□□ -2.15
RPS28BP0C0X0 RIF2YLR453C 1188 nt1.59□□□□□ -2.15
RPS28BP0C0X0 YML084WYML084W 309 nt1.59□□□□□ -2.15
RPS28BP0C0X0 MRPL40YPL173W 894 nt1.59□□□□□ -2.15
RPS28BP0C0X0 UTP21YLR409C 2820 nt1.58□□□□□ -2.16
RPS28BP0C0X0 ECM5YMR176W 4236 nt1.58□□□□□ -2.16
RPS28BP0C0X0 TBS1YBR150C 3285 nt1.58□□□□□ -2.16
RPS28BP0C0X0 RSC58YLR033W 1509 nt1.58□□□□□ -2.16
RPS28BP0C0X0 YCR099CYCR099C 468 nt1.58□□□□□ -2.16
RPS28BP0C0X0 AYR1YIL124W 894 nt1.58□□□□□ -2.16
RPS28BP0C0X0 TMA19YKL056C 504 nt1.58□□□□□ -2.16
RPS28BP0C0X0 YLL044WYLL044W 447 nt1.58□□□□□ -2.16
RPS28BP0C0X0 NIT3YLR351C 876 nt1.58□□□□□ -2.16
RPS28BP0C0X0 GIM3YNL153C 390 nt1.58□□□□□ -2.16
RPS28BP0C0X0 DUG3YNL191W 1074 nt1.58□□□□□ -2.16
RPS28BP0C0X0 YPL136WYPL136W 369 nt1.58□□□□□ -2.16
RPS28BP0C0X0 YBR209WYBR209W 318 nt1.58□□□□□ -2.16
RPS28BP0C0X0 SBE22YHR103W 2559 nt1.58□□□□□ -2.16
RPS28BP0C0X0 YDR170W-AYDR170W-A 1323 nt1.58□□□□□ -2.16
RPS28BP0C0X0 YBL005W-AYBL005W-A 1323 nt1.58□□□□□ -2.16
RPS28BP0C0X0 YMR046CYMR046C 1323 nt1.58□□□□□ -2.16
RPS28BP0C0X0 YNL284C-AYNL284C-A 1323 nt1.58□□□□□ -2.16
RPS28BP0C0X0 PAF1YBR279W 1338 nt1.58□□□□□ -2.16
RPS28BP0C0X0 SRP1YNL189W 1629 nt1.58□□□□□ -2.16
RPS28BP0C0X0 ASI3YNL008C 2031 nt1.57□□□□□ -2.16
RPS28BP0C0X0 MMS22YLR320W 4365 nt1.57□□□□□ -2.16
RPS28BP0C0X0 HSH155YMR288W 2916 nt1.57□□□□□ -2.16
RPS28BP0C0X0 BCK1YJL095W 4437 nt1.57□□□□□ -2.16
RPS28BP0C0X0 MSW1YDR268W 1140 nt1.57□□□□□ -2.16
RPS28BP0C0X0 DDI2YFL061W 678 nt1.57□□□□□ -2.16
RPS28BP0C0X0 MLC1YGL106W 450 nt1.57□□□□□ -2.16
RPS28BP0C0X0 YKR033CYKR033C 426 nt1.57□□□□□ -2.16
RPS28BP0C0X0 LSM2YBL026W 288 nt1.57□□□□□ -2.16
RPS28BP0C0X0 YMR099CYMR099C 894 nt1.57□□□□□ -2.16
RPS28BP0C0X0 RPL16BYNL069C 597 nt1.57□□□□□ -2.16
RPS28BP0C0X0 SAR1YPL218W 573 nt1.57□□□□□ -2.16
RPS28BP0C0X0 VPS35YJL154C 2835 nt1.56□□□□□ -2.16
RPS28BP0C0X0 SRB4YER022W 2064 nt1.56□□□□□ -2.16
RPS28BP0C0X0 YDL118WYDL118W 381 nt1.56□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 20.7 ms