Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPARCP09486 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPARCP09486 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SPARCP09486 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SPARCP09486 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.52■□□□□ 0.56
SPARCP09486 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SPARCP09486 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SPARCP09486 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SPARCP09486 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPARCP09486 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SPARCP09486 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.52■□□□□ 0.56
SPARCP09486 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.52■□□□□ 0.56
SPARCP09486 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.52■□□□□ 0.56
SPARCP09486 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPARCP09486 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SPARCP09486 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SPARCP09486 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.52■□□□□ 0.55
SPARCP09486 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SPARCP09486 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
SPARCP09486 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SPARCP09486 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.52■□□□□ 0.55
SPARCP09486 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
SPARCP09486 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SPARCP09486 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.52■□□□□ 0.55
SPARCP09486 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SPARCP09486 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SPARCP09486 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPARCP09486 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPARCP09486 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.51■□□□□ 0.55
SPARCP09486 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPARCP09486 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SPARCP09486 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.51■□□□□ 0.55
SPARCP09486 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.51■□□□□ 0.55
SPARCP09486 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.51■□□□□ 0.55
SPARCP09486 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPARCP09486 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPARCP09486 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SPARCP09486 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SPARCP09486 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.5■□□□□ 0.55
SPARCP09486 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.5■□□□□ 0.55
SPARCP09486 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SPARCP09486 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SPARCP09486 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.5■□□□□ 0.55
SPARCP09486 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPARCP09486 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPARCP09486 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPARCP09486 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SPARCP09486 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.5■□□□□ 0.55
SPARCP09486 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.5■□□□□ 0.55
SPARCP09486 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SPARCP09486 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SPARCP09486 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPARCP09486 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
SPARCP09486 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SPARCP09486 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SPARCP09486 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SPARCP09486 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SPARCP09486 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SPARCP09486 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
SPARCP09486 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SPARCP09486 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SPARCP09486 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.49■□□□□ 0.55
SPARCP09486 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.49■□□□□ 0.55
SPARCP09486 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.49■□□□□ 0.55
SPARCP09486 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SPARCP09486 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SPARCP09486 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SPARCP09486 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SPARCP09486 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.49■□□□□ 0.55
SPARCP09486 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SPARCP09486 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.49■□□□□ 0.55
SPARCP09486 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.49■□□□□ 0.55
SPARCP09486 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SPARCP09486 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.48■□□□□ 0.55
SPARCP09486 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SPARCP09486 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.48■□□□□ 0.55
SPARCP09486 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPARCP09486 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPARCP09486 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPARCP09486 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.48■□□□□ 0.55
SPARCP09486 AL136967.2-201ENST00000623968 743 ntBASIC18.48■□□□□ 0.55
SPARCP09486 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPARCP09486 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPARCP09486 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SPARCP09486 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
SPARCP09486 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SPARCP09486 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPARCP09486 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPARCP09486 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPARCP09486 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.48■□□□□ 0.55
SPARCP09486 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SPARCP09486 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SPARCP09486 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SPARCP09486 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SPARCP09486 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SPARCP09486 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SPARCP09486 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SPARCP09486 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SPARCP09486 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SPARCP09486 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms