Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MRPL3P09001 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MRPL3P09001 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MRPL3P09001 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
MRPL3P09001 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MRPL3P09001 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
MRPL3P09001 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MRPL3P09001 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
MRPL3P09001 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
MRPL3P09001 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MRPL3P09001 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MRPL3P09001 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
MRPL3P09001 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
MRPL3P09001 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.66■□□□□ 0.58
MRPL3P09001 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MRPL3P09001 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
MRPL3P09001 AP005212.1-201ENST00000581547 1997 ntBASIC18.66■□□□□ 0.58
MRPL3P09001 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MRPL3P09001 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MRPL3P09001 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MRPL3P09001 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.66■□□□□ 0.58
MRPL3P09001 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MRPL3P09001 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MRPL3P09001 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.66■□□□□ 0.58
MRPL3P09001 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MRPL3P09001 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MRPL3P09001 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MRPL3P09001 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
MRPL3P09001 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
MRPL3P09001 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.65■□□□□ 0.58
MRPL3P09001 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
MRPL3P09001 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MRPL3P09001 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MRPL3P09001 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
MRPL3P09001 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
MRPL3P09001 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
MRPL3P09001 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.65■□□□□ 0.58
MRPL3P09001 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.65■□□□□ 0.58
MRPL3P09001 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.65■□□□□ 0.58
MRPL3P09001 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
MRPL3P09001 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.65■□□□□ 0.58
MRPL3P09001 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MRPL3P09001 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MRPL3P09001 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MRPL3P09001 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MRPL3P09001 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.65■□□□□ 0.58
MRPL3P09001 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MRPL3P09001 GABARAPL3-202ENST00000624044 1851 ntBASIC18.65■□□□□ 0.58
MRPL3P09001 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MRPL3P09001 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.64■□□□□ 0.58
MRPL3P09001 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MRPL3P09001 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.64■□□□□ 0.57
MRPL3P09001 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
MRPL3P09001 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
MRPL3P09001 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MRPL3P09001 MIR4767-201ENST00000582827 78 ntBASIC18.64■□□□□ 0.57
MRPL3P09001 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.64■□□□□ 0.57
MRPL3P09001 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
MRPL3P09001 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MRPL3P09001 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MRPL3P09001 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
MRPL3P09001 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.64■□□□□ 0.57
MRPL3P09001 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MRPL3P09001 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
MRPL3P09001 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
MRPL3P09001 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
MRPL3P09001 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MRPL3P09001 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MRPL3P09001 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MRPL3P09001 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
MRPL3P09001 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MRPL3P09001 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
MRPL3P09001 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MRPL3P09001 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.63■□□□□ 0.57
MRPL3P09001 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.63■□□□□ 0.57
MRPL3P09001 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MRPL3P09001 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MRPL3P09001 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.63■□□□□ 0.57
MRPL3P09001 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MRPL3P09001 AC121338.2-201ENST00000622535 1744 ntBASIC18.63■□□□□ 0.57
MRPL3P09001 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRPL3P09001 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRPL3P09001 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRPL3P09001 AL136116.3-201ENST00000402907 1138 ntBASIC18.62■□□□□ 0.57
MRPL3P09001 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.62■□□□□ 0.57
MRPL3P09001 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MRPL3P09001 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.62■□□□□ 0.57
MRPL3P09001 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.62■□□□□ 0.57
MRPL3P09001 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
MRPL3P09001 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
MRPL3P09001 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRPL3P09001 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.62■□□□□ 0.57
MRPL3P09001 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MRPL3P09001 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
MRPL3P09001 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRPL3P09001 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRPL3P09001 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.62■□□□□ 0.57
MRPL3P09001 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
MRPL3P09001 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MRPL3P09001 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms