Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.24■□□□□ 0.99
COL4A2P08572 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL4A2P08572 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.24■□□□□ 0.99
COL4A2P08572 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
COL4A2P08572 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL4A2P08572 POM121L13P-201ENST00000422362 380 ntBASIC21.24■□□□□ 0.99
COL4A2P08572 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL4A2P08572 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL4A2P08572 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL4A2P08572 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.24■□□□□ 0.99
COL4A2P08572 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.24■□□□□ 0.99
COL4A2P08572 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.24■□□□□ 0.99
COL4A2P08572 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL4A2P08572 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL4A2P08572 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.23■□□□□ 0.99
COL4A2P08572 AC010542.4-201ENST00000563151 1910 ntBASIC21.23■□□□□ 0.99
COL4A2P08572 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
COL4A2P08572 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
COL4A2P08572 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL4A2P08572 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL4A2P08572 AC087633.2-202ENST00000565166 1439 ntBASIC21.23■□□□□ 0.99
COL4A2P08572 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
COL4A2P08572 KRT17P3-201ENST00000420566 1262 ntBASIC21.23■□□□□ 0.99
COL4A2P08572 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.23■□□□□ 0.99
COL4A2P08572 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.23■□□□□ 0.99
COL4A2P08572 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL4A2P08572 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.23■□□□□ 0.99
COL4A2P08572 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.22■□□□□ 0.99
COL4A2P08572 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
COL4A2P08572 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL4A2P08572 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.22■□□□□ 0.99
COL4A2P08572 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL4A2P08572 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL4A2P08572 AC092053.2-201ENST00000640557 1818 ntBASIC21.22■□□□□ 0.99
COL4A2P08572 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL4A2P08572 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
COL4A2P08572 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.22■□□□□ 0.99
COL4A2P08572 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL4A2P08572 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
COL4A2P08572 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.22■□□□□ 0.99
COL4A2P08572 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL4A2P08572 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL4A2P08572 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL4A2P08572 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL4A2P08572 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.21■□□□□ 0.99
COL4A2P08572 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
COL4A2P08572 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
COL4A2P08572 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL4A2P08572 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL4A2P08572 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL4A2P08572 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL4A2P08572 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.21■□□□□ 0.99
COL4A2P08572 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.21■□□□□ 0.99
COL4A2P08572 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.21■□□□□ 0.99
COL4A2P08572 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL4A2P08572 AC073912.3-201ENST00000624414 853 ntBASIC21.21■□□□□ 0.99
COL4A2P08572 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL4A2P08572 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL4A2P08572 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.21■□□□□ 0.99
COL4A2P08572 AC080038.3-201ENST00000623346 1952 ntBASIC21.21■□□□□ 0.99
COL4A2P08572 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL4A2P08572 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL4A2P08572 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
COL4A2P08572 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
COL4A2P08572 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL4A2P08572 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
COL4A2P08572 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
COL4A2P08572 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL4A2P08572 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.2■□□□□ 0.98
COL4A2P08572 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.2■□□□□ 0.98
COL4A2P08572 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.2■□□□□ 0.98
COL4A2P08572 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL4A2P08572 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL4A2P08572 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL4A2P08572 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.2■□□□□ 0.98
COL4A2P08572 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.19■□□□□ 0.98
COL4A2P08572 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.19■□□□□ 0.98
COL4A2P08572 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.19■□□□□ 0.98
COL4A2P08572 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL4A2P08572 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL4A2P08572 MIR718-201ENST00000390190 70 ntBASIC21.19■□□□□ 0.98
COL4A2P08572 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.19■□□□□ 0.98
COL4A2P08572 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.19■□□□□ 0.98
COL4A2P08572 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
COL4A2P08572 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.19■□□□□ 0.98
COL4A2P08572 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.19■□□□□ 0.98
COL4A2P08572 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.19■□□□□ 0.98
COL4A2P08572 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.19■□□□□ 0.98
COL4A2P08572 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.19■□□□□ 0.98
COL4A2P08572 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
COL4A2P08572 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL4A2P08572 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL4A2P08572 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL4A2P08572 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL4A2P08572 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.19■□□□□ 0.98
COL4A2P08572 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL4A2P08572 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL4A2P08572 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL4A2P08572 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL4A2P08572 SNORA78-201ENST00000459373 127 ntBASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms