Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
APOC1P02654 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
APOC1P02654 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APOC1P02654 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.36■□□□□ 0.53
APOC1P02654 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.36■□□□□ 0.53
APOC1P02654 AC012414.1-201ENST00000556676 535 ntBASIC18.36■□□□□ 0.53
APOC1P02654 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
APOC1P02654 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APOC1P02654 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.35■□□□□ 0.53
APOC1P02654 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.35■□□□□ 0.53
APOC1P02654 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
APOC1P02654 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
APOC1P02654 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
APOC1P02654 AL049796.1-201ENST00000565336 1766 ntBASIC18.35■□□□□ 0.53
APOC1P02654 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
APOC1P02654 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.35■□□□□ 0.53
APOC1P02654 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.35■□□□□ 0.53
APOC1P02654 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.35■□□□□ 0.53
APOC1P02654 SUDS3P1-201ENST00000505831 966 ntBASIC18.35■□□□□ 0.53
APOC1P02654 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.35■□□□□ 0.53
APOC1P02654 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.35■□□□□ 0.53
APOC1P02654 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.35■□□□□ 0.53
APOC1P02654 AL358852.1-201ENST00000623174 1268 ntBASIC18.35■□□□□ 0.53
APOC1P02654 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
APOC1P02654 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APOC1P02654 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APOC1P02654 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APOC1P02654 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.35■□□□□ 0.53
APOC1P02654 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APOC1P02654 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APOC1P02654 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.34■□□□□ 0.53
APOC1P02654 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.34■□□□□ 0.53
APOC1P02654 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
APOC1P02654 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APOC1P02654 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APOC1P02654 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.34■□□□□ 0.53
APOC1P02654 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.34■□□□□ 0.53
APOC1P02654 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APOC1P02654 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APOC1P02654 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APOC1P02654 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APOC1P02654 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APOC1P02654 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APOC1P02654 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APOC1P02654 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.34■□□□□ 0.53
APOC1P02654 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
APOC1P02654 AL031432.3-201ENST00000607698 485 ntBASIC18.34■□□□□ 0.53
APOC1P02654 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
APOC1P02654 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
APOC1P02654 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APOC1P02654 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APOC1P02654 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
APOC1P02654 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
APOC1P02654 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
APOC1P02654 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
APOC1P02654 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
APOC1P02654 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
APOC1P02654 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.33■□□□□ 0.53
APOC1P02654 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APOC1P02654 AC142381.2-201ENST00000566120 298 ntBASIC18.33■□□□□ 0.52
APOC1P02654 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
APOC1P02654 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.33■□□□□ 0.52
APOC1P02654 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
APOC1P02654 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.33■□□□□ 0.52
APOC1P02654 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.33■□□□□ 0.52
APOC1P02654 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APOC1P02654 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APOC1P02654 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.32■□□□□ 0.52
APOC1P02654 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APOC1P02654 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
APOC1P02654 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APOC1P02654 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.32■□□□□ 0.52
APOC1P02654 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.32■□□□□ 0.52
APOC1P02654 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APOC1P02654 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
APOC1P02654 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APOC1P02654 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
APOC1P02654 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.31■□□□□ 0.52
APOC1P02654 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
APOC1P02654 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.31■□□□□ 0.52
APOC1P02654 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.31■□□□□ 0.52
APOC1P02654 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
APOC1P02654 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
APOC1P02654 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
APOC1P02654 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
APOC1P02654 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
APOC1P02654 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
APOC1P02654 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
APOC1P02654 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
APOC1P02654 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.31■□□□□ 0.52
APOC1P02654 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.31■□□□□ 0.52
APOC1P02654 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
APOC1P02654 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.31■□□□□ 0.52
APOC1P02654 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.31■□□□□ 0.52
APOC1P02654 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
APOC1P02654 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
APOC1P02654 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
APOC1P02654 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
APOC1P02654 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
APOC1P02654 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms