Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
COL1A1P02452 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC25.3■■□□□ 1.64
COL1A1P02452 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
COL1A1P02452 KRT17P1-201ENST00000399211 1546 ntBASIC25.29■■□□□ 1.64
COL1A1P02452 GAS7-202ENST00000396115 929 ntTSL 5 BASIC25.29■■□□□ 1.64
COL1A1P02452 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
COL1A1P02452 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC25.29■■□□□ 1.64
COL1A1P02452 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC25.29■■□□□ 1.64
COL1A1P02452 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC25.29■■□□□ 1.64
COL1A1P02452 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
COL1A1P02452 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
COL1A1P02452 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
COL1A1P02452 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL1A1P02452 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL1A1P02452 PTPA-214ENST00000423100 988 ntTSL 2 BASIC25.28■■□□□ 1.64
COL1A1P02452 DUSP5P2-201ENST00000426873 1033 ntBASIC25.28■■□□□ 1.64
COL1A1P02452 FAM21FP-204ENST00000608637 956 ntBASIC25.28■■□□□ 1.64
COL1A1P02452 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL1A1P02452 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
COL1A1P02452 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL1A1P02452 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL1A1P02452 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL1A1P02452 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL1A1P02452 AL355472.2-201ENST00000422958 438 ntBASIC25.28■■□□□ 1.64
COL1A1P02452 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC25.28■■□□□ 1.64
COL1A1P02452 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC25.28■■□□□ 1.64
COL1A1P02452 AC091874.3-201ENST00000512672 1195 ntBASIC25.28■■□□□ 1.64
COL1A1P02452 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL1A1P02452 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL1A1P02452 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL1A1P02452 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL1A1P02452 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL1A1P02452 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
COL1A1P02452 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL1A1P02452 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL1A1P02452 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC25.27■■□□□ 1.64
COL1A1P02452 AC097658.1-201ENST00000475555 843 ntBASIC25.27■■□□□ 1.64
COL1A1P02452 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL1A1P02452 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC25.26■■□□□ 1.63
COL1A1P02452 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
COL1A1P02452 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
COL1A1P02452 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
COL1A1P02452 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
COL1A1P02452 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
COL1A1P02452 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
COL1A1P02452 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
COL1A1P02452 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC25.26■■□□□ 1.63
COL1A1P02452 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC25.26■■□□□ 1.63
COL1A1P02452 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC25.26■■□□□ 1.63
COL1A1P02452 PBX1-209ENST00000485769 834 ntTSL 2 BASIC25.26■■□□□ 1.63
COL1A1P02452 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC25.26■■□□□ 1.63
COL1A1P02452 MFF-203ENST00000349901 1716 ntTSL 2 BASIC25.26■■□□□ 1.63
COL1A1P02452 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
COL1A1P02452 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC25.25■■□□□ 1.63
COL1A1P02452 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
COL1A1P02452 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC25.25■■□□□ 1.63
COL1A1P02452 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
COL1A1P02452 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
COL1A1P02452 CASP6-205ENST00000505486 538 ntTSL 4 BASIC25.25■■□□□ 1.63
COL1A1P02452 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC25.25■■□□□ 1.63
COL1A1P02452 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
COL1A1P02452 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
COL1A1P02452 GOLGA2P6-201ENST00000340929 2049 ntBASIC25.25■■□□□ 1.63
COL1A1P02452 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
COL1A1P02452 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC25.25■■□□□ 1.63
COL1A1P02452 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
COL1A1P02452 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
COL1A1P02452 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
COL1A1P02452 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC25.24■■□□□ 1.63
COL1A1P02452 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL1A1P02452 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL1A1P02452 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL1A1P02452 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
COL1A1P02452 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL1A1P02452 ESRRAP1-201ENST00000400596 1257 ntBASIC25.24■■□□□ 1.63
COL1A1P02452 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL1A1P02452 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC25.24■■□□□ 1.63
COL1A1P02452 AP006294.2-201ENST00000641667 209 ntBASIC25.24■■□□□ 1.63
COL1A1P02452 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL1A1P02452 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL1A1P02452 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL1A1P02452 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC25.24■■□□□ 1.63
COL1A1P02452 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL1A1P02452 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC25.23■■□□□ 1.63
COL1A1P02452 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
COL1A1P02452 BET1L-207ENST00000529614 560 ntTSL 5 BASIC25.23■■□□□ 1.63
COL1A1P02452 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
COL1A1P02452 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
COL1A1P02452 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC25.23■■□□□ 1.63
COL1A1P02452 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
COL1A1P02452 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC25.23■■□□□ 1.63
COL1A1P02452 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC25.23■■□□□ 1.63
COL1A1P02452 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL1A1P02452 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL1A1P02452 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
COL1A1P02452 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
COL1A1P02452 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL1A1P02452 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL1A1P02452 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
COL1A1P02452 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms