Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN1O95832 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.61■□□□□ 0.57
CLDN1O95832 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN1O95832 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN1O95832 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN1O95832 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.61■□□□□ 0.57
CLDN1O95832 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
CLDN1O95832 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN1O95832 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN1O95832 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN1O95832 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN1O95832 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN1O95832 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN1O95832 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CLDN1O95832 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN1O95832 AC092068.2-201ENST00000590491 1708 ntBASIC18.6■□□□□ 0.57
CLDN1O95832 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN1O95832 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLDN1O95832 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.6■□□□□ 0.57
CLDN1O95832 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN1O95832 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.6■□□□□ 0.57
CLDN1O95832 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN1O95832 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLDN1O95832 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN1O95832 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN1O95832 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN1O95832 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.6■□□□□ 0.57
CLDN1O95832 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CLDN1O95832 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.6■□□□□ 0.57
CLDN1O95832 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.6■□□□□ 0.57
CLDN1O95832 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN1O95832 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.6■□□□□ 0.57
CLDN1O95832 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.6■□□□□ 0.57
CLDN1O95832 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.6■□□□□ 0.57
CLDN1O95832 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.6■□□□□ 0.57
CLDN1O95832 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CLDN1O95832 AC053503.5-201ENST00000601508 636 ntBASIC18.6■□□□□ 0.57
CLDN1O95832 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN1O95832 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN1O95832 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
CLDN1O95832 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.6■□□□□ 0.57
CLDN1O95832 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.6■□□□□ 0.57
CLDN1O95832 AP004607.7-201ENST00000527152 1677 ntBASIC18.6■□□□□ 0.57
CLDN1O95832 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN1O95832 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CLDN1O95832 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
CLDN1O95832 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN1O95832 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CLDN1O95832 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CLDN1O95832 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN1O95832 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CLDN1O95832 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CLDN1O95832 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN1O95832 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CLDN1O95832 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CLDN1O95832 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN1O95832 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CLDN1O95832 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN1O95832 LSM12P1-201ENST00000411836 588 ntBASIC18.59■□□□□ 0.57
CLDN1O95832 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN1O95832 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CLDN1O95832 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN1O95832 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.59■□□□□ 0.57
CLDN1O95832 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.59■□□□□ 0.57
CLDN1O95832 BX088651.1-201ENST00000540551 451 ntBASIC18.59■□□□□ 0.57
CLDN1O95832 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN1O95832 AL162412.1-201ENST00000567129 965 ntBASIC18.59■□□□□ 0.57
CLDN1O95832 AL591742.1-201ENST00000604433 565 ntBASIC18.59■□□□□ 0.57
CLDN1O95832 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.59■□□□□ 0.57
CLDN1O95832 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CLDN1O95832 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CLDN1O95832 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN1O95832 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CLDN1O95832 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CLDN1O95832 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN1O95832 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.58■□□□□ 0.57
CLDN1O95832 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.58■□□□□ 0.57
CLDN1O95832 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.58■□□□□ 0.57
CLDN1O95832 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN1O95832 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN1O95832 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CLDN1O95832 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN1O95832 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN1O95832 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN1O95832 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.58■□□□□ 0.56
CLDN1O95832 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN1O95832 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CLDN1O95832 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CLDN1O95832 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.58■□□□□ 0.56
CLDN1O95832 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.58■□□□□ 0.56
CLDN1O95832 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN1O95832 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CLDN1O95832 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN1O95832 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN1O95832 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
CLDN1O95832 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CLDN1O95832 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN1O95832 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN1O95832 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.57■□□□□ 0.56
CLDN1O95832 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms