Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 AC008175.2-201ENST00000612840 297 ntBASIC20.44■□□□□ 0.86
CPNE6O95741 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPNE6O95741 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPNE6O95741 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.44■□□□□ 0.86
CPNE6O95741 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CPNE6O95741 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CPNE6O95741 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.43■□□□□ 0.86
CPNE6O95741 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE6O95741 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
CPNE6O95741 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.43■□□□□ 0.86
CPNE6O95741 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE6O95741 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.43■□□□□ 0.86
CPNE6O95741 ABHD17AP1-201ENST00000358206 933 ntBASIC20.43■□□□□ 0.86
CPNE6O95741 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE6O95741 AL138781.1-201ENST00000566567 1274 ntBASIC20.43■□□□□ 0.86
CPNE6O95741 AC105036.2-201ENST00000569468 176 ntBASIC20.43■□□□□ 0.86
CPNE6O95741 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE6O95741 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE6O95741 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE6O95741 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.43■□□□□ 0.86
CPNE6O95741 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE6O95741 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE6O95741 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.42■□□□□ 0.86
CPNE6O95741 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CPNE6O95741 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CPNE6O95741 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPNE6O95741 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CPNE6O95741 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPNE6O95741 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CPNE6O95741 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPNE6O95741 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPNE6O95741 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPNE6O95741 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.42■□□□□ 0.86
CPNE6O95741 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.42■□□□□ 0.86
CPNE6O95741 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.42■□□□□ 0.86
CPNE6O95741 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPNE6O95741 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPNE6O95741 AC092667.1-201ENST00000434301 2586 ntBASIC20.41■□□□□ 0.86
CPNE6O95741 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.41■□□□□ 0.86
CPNE6O95741 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE6O95741 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CPNE6O95741 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.41■□□□□ 0.86
CPNE6O95741 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.41■□□□□ 0.86
CPNE6O95741 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.41■□□□□ 0.86
CPNE6O95741 POU5F1P4-201ENST00000413175 1085 ntBASIC20.41■□□□□ 0.86
CPNE6O95741 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.41■□□□□ 0.86
CPNE6O95741 AC007322.4-201ENST00000509611 723 ntBASIC20.41■□□□□ 0.86
CPNE6O95741 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.41■□□□□ 0.86
CPNE6O95741 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CPNE6O95741 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE6O95741 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE6O95741 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.41■□□□□ 0.86
CPNE6O95741 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE6O95741 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE6O95741 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE6O95741 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.41■□□□□ 0.86
CPNE6O95741 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CPNE6O95741 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CPNE6O95741 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE6O95741 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE6O95741 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CPNE6O95741 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE6O95741 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE6O95741 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE6O95741 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE6O95741 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE6O95741 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE6O95741 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE6O95741 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE6O95741 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE6O95741 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CPNE6O95741 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.4■□□□□ 0.86
CPNE6O95741 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.4■□□□□ 0.86
CPNE6O95741 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE6O95741 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.4■□□□□ 0.86
CPNE6O95741 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.4■□□□□ 0.86
CPNE6O95741 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE6O95741 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE6O95741 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
CPNE6O95741 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.39■□□□□ 0.86
CPNE6O95741 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CPNE6O95741 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CPNE6O95741 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CPNE6O95741 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CPNE6O95741 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE6O95741 AC068338.2-201ENST00000563278 1430 ntBASIC20.39■□□□□ 0.85
CPNE6O95741 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CPNE6O95741 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE6O95741 KRT18P6-201ENST00000555540 1265 ntBASIC20.39■□□□□ 0.85
CPNE6O95741 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.39■□□□□ 0.85
CPNE6O95741 AC133041.1-202ENST00000642053 222 ntBASIC20.39■□□□□ 0.85
CPNE6O95741 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CPNE6O95741 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE6O95741 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE6O95741 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE6O95741 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE6O95741 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.38■□□□□ 0.85
CPNE6O95741 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CPNE6O95741 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPNE6O95741 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms