Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBL3O95164 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBL3O95164 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBL3O95164 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBL3O95164 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBL3O95164 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBL3O95164 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBL3O95164 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBL3O95164 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBL3O95164 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBL3O95164 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.63■□□□□ 0.57
UBL3O95164 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBL3O95164 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBL3O95164 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBL3O95164 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBL3O95164 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.63■□□□□ 0.57
UBL3O95164 AC097381.1-201ENST00000429019 1296 ntBASIC18.63■□□□□ 0.57
UBL3O95164 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.63■□□□□ 0.57
UBL3O95164 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBL3O95164 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.63■□□□□ 0.57
UBL3O95164 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBL3O95164 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.63■□□□□ 0.57
UBL3O95164 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBL3O95164 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.63■□□□□ 0.57
UBL3O95164 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBL3O95164 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBL3O95164 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBL3O95164 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
UBL3O95164 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBL3O95164 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
UBL3O95164 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBL3O95164 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.62■□□□□ 0.57
UBL3O95164 AC079140.4-201ENST00000507448 529 ntBASIC18.62■□□□□ 0.57
UBL3O95164 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.62■□□□□ 0.57
UBL3O95164 TERF1P2-201ENST00000583350 1212 ntBASIC18.62■□□□□ 0.57
UBL3O95164 MIR6821-201ENST00000617625 74 ntBASIC18.62■□□□□ 0.57
UBL3O95164 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBL3O95164 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBL3O95164 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBL3O95164 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBL3O95164 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.62■□□□□ 0.57
UBL3O95164 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBL3O95164 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBL3O95164 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
UBL3O95164 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBL3O95164 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
UBL3O95164 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBL3O95164 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBL3O95164 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBL3O95164 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.61■□□□□ 0.57
UBL3O95164 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
UBL3O95164 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.61■□□□□ 0.57
UBL3O95164 RARRES2P6-201ENST00000567333 442 ntBASIC18.61■□□□□ 0.57
UBL3O95164 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.61■□□□□ 0.57
UBL3O95164 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBL3O95164 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBL3O95164 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.61■□□□□ 0.57
UBL3O95164 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBL3O95164 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBL3O95164 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.6■□□□□ 0.57
UBL3O95164 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.6■□□□□ 0.57
UBL3O95164 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UBL3O95164 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBL3O95164 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UBL3O95164 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.6■□□□□ 0.57
UBL3O95164 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UBL3O95164 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.6■□□□□ 0.57
UBL3O95164 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UBL3O95164 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.6■□□□□ 0.57
UBL3O95164 CCDC92B-201ENST00000575506 885 ntBASIC18.6■□□□□ 0.57
UBL3O95164 AC104564.3-201ENST00000582367 638 ntBASIC18.6■□□□□ 0.57
UBL3O95164 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UBL3O95164 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.6■□□□□ 0.57
UBL3O95164 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
UBL3O95164 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBL3O95164 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
UBL3O95164 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
UBL3O95164 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBL3O95164 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.6■□□□□ 0.57
UBL3O95164 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBL3O95164 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.59■□□□□ 0.57
UBL3O95164 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
UBL3O95164 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBL3O95164 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBL3O95164 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
UBL3O95164 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBL3O95164 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBL3O95164 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBL3O95164 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBL3O95164 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBL3O95164 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
UBL3O95164 KRT18P14-201ENST00000534205 1250 ntBASIC18.59■□□□□ 0.57
UBL3O95164 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.59■□□□□ 0.57
UBL3O95164 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.59■□□□□ 0.57
UBL3O95164 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.59■□□□□ 0.57
UBL3O95164 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
UBL3O95164 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBL3O95164 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBL3O95164 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBL3O95164 AC007952.6-201ENST00000573168 2673 ntBASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms