Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.33■□□□□ 0.85
NPHS1O60500 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.33■□□□□ 0.85
NPHS1O60500 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.33■□□□□ 0.85
NPHS1O60500 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NPHS1O60500 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.33■□□□□ 0.85
NPHS1O60500 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NPHS1O60500 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NPHS1O60500 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NPHS1O60500 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
NPHS1O60500 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NPHS1O60500 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NPHS1O60500 BX005040.4-201ENST00000637145 1518 ntBASIC20.32■□□□□ 0.84
NPHS1O60500 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPHS1O60500 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
NPHS1O60500 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPHS1O60500 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
NPHS1O60500 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPHS1O60500 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NPHS1O60500 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.32■□□□□ 0.84
NPHS1O60500 AC024257.2-201ENST00000549699 147 ntBASIC20.32■□□□□ 0.84
NPHS1O60500 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPHS1O60500 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.32■□□□□ 0.84
NPHS1O60500 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.32■□□□□ 0.84
NPHS1O60500 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPHS1O60500 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NPHS1O60500 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
NPHS1O60500 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.31■□□□□ 0.84
NPHS1O60500 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPHS1O60500 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
NPHS1O60500 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.31■□□□□ 0.84
NPHS1O60500 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
NPHS1O60500 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPHS1O60500 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NPHS1O60500 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPHS1O60500 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPHS1O60500 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
NPHS1O60500 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.31■□□□□ 0.84
NPHS1O60500 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPHS1O60500 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPHS1O60500 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NPHS1O60500 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NPHS1O60500 AC105233.4-201ENST00000642045 216 ntBASIC20.31■□□□□ 0.84
NPHS1O60500 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NPHS1O60500 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
NPHS1O60500 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPHS1O60500 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
NPHS1O60500 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
NPHS1O60500 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
NPHS1O60500 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPHS1O60500 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPHS1O60500 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPHS1O60500 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.3■□□□□ 0.84
NPHS1O60500 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPHS1O60500 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPHS1O60500 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPHS1O60500 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPHS1O60500 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPHS1O60500 AL136162.1-201ENST00000607711 1078 ntBASIC20.3■□□□□ 0.84
NPHS1O60500 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.3■□□□□ 0.84
NPHS1O60500 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.3■□□□□ 0.84
NPHS1O60500 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NPHS1O60500 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
NPHS1O60500 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NPHS1O60500 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPHS1O60500 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NPHS1O60500 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPHS1O60500 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NPHS1O60500 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPHS1O60500 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.29■□□□□ 0.84
NPHS1O60500 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
NPHS1O60500 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.29■□□□□ 0.84
NPHS1O60500 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
NPHS1O60500 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.29■□□□□ 0.84
NPHS1O60500 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.29■□□□□ 0.84
NPHS1O60500 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.29■□□□□ 0.84
NPHS1O60500 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.29■□□□□ 0.84
NPHS1O60500 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPHS1O60500 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPHS1O60500 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPHS1O60500 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPHS1O60500 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPHS1O60500 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPHS1O60500 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.28■□□□□ 0.84
NPHS1O60500 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.28■□□□□ 0.84
NPHS1O60500 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.28■□□□□ 0.84
NPHS1O60500 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.28■□□□□ 0.84
NPHS1O60500 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
NPHS1O60500 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NPHS1O60500 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NPHS1O60500 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.28■□□□□ 0.84
NPHS1O60500 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.28■□□□□ 0.84
NPHS1O60500 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.28■□□□□ 0.84
NPHS1O60500 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NPHS1O60500 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NPHS1O60500 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.28■□□□□ 0.84
NPHS1O60500 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NPHS1O60500 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
NPHS1O60500 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPHS1O60500 AC135279.3-201ENST00000610945 1311 ntBASIC20.27■□□□□ 0.84
NPHS1O60500 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms