Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX5O60225 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX5O60225 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX5O60225 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SSX5O60225 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.81■□□□□ 0.44
SSX5O60225 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SSX5O60225 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SSX5O60225 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SSX5O60225 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SSX5O60225 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SSX5O60225 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSX5O60225 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SSX5O60225 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.8■□□□□ 0.44
SSX5O60225 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSX5O60225 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SSX5O60225 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSX5O60225 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SSX5O60225 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSX5O60225 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SSX5O60225 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSX5O60225 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SSX5O60225 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSX5O60225 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.79■□□□□ 0.44
SSX5O60225 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSX5O60225 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SSX5O60225 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSX5O60225 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
SSX5O60225 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSX5O60225 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SSX5O60225 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSX5O60225 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.79■□□□□ 0.44
SSX5O60225 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SSX5O60225 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SSX5O60225 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SSX5O60225 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.79■□□□□ 0.44
SSX5O60225 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.79■□□□□ 0.44
SSX5O60225 AC009299.2-201ENST00000482477 511 ntBASIC17.79■□□□□ 0.44
SSX5O60225 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.79■□□□□ 0.44
SSX5O60225 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.79■□□□□ 0.44
SSX5O60225 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSX5O60225 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SSX5O60225 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSX5O60225 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
SSX5O60225 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
SSX5O60225 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.79■□□□□ 0.44
SSX5O60225 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.79■□□□□ 0.44
SSX5O60225 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SSX5O60225 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSX5O60225 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX5O60225 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX5O60225 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SSX5O60225 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SSX5O60225 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX5O60225 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.78■□□□□ 0.44
SSX5O60225 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX5O60225 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.78■□□□□ 0.44
SSX5O60225 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX5O60225 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SSX5O60225 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX5O60225 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX5O60225 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX5O60225 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SSX5O60225 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.78■□□□□ 0.44
SSX5O60225 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.78■□□□□ 0.44
SSX5O60225 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SSX5O60225 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX5O60225 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX5O60225 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX5O60225 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
SSX5O60225 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SSX5O60225 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX5O60225 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.78■□□□□ 0.44
SSX5O60225 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX5O60225 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.78■□□□□ 0.44
SSX5O60225 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SSX5O60225 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SSX5O60225 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.78■□□□□ 0.44
SSX5O60225 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.78■□□□□ 0.44
SSX5O60225 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SSX5O60225 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.77■□□□□ 0.44
SSX5O60225 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.77■□□□□ 0.44
SSX5O60225 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSX5O60225 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.77■□□□□ 0.44
SSX5O60225 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSX5O60225 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
SSX5O60225 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSX5O60225 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.44
SSX5O60225 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
SSX5O60225 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
SSX5O60225 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SSX5O60225 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.77■□□□□ 0.43
SSX5O60225 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.77■□□□□ 0.43
SSX5O60225 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
SSX5O60225 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SSX5O60225 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
SSX5O60225 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSX5O60225 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.76■□□□□ 0.43
SSX5O60225 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSX5O60225 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
SSX5O60225 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms