Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CXCL13O43927 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
CXCL13O43927 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CXCL13O43927 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CXCL13O43927 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.71■□□□□ 0.59
CXCL13O43927 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CXCL13O43927 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.71■□□□□ 0.59
CXCL13O43927 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.71■□□□□ 0.59
CXCL13O43927 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.71■□□□□ 0.59
CXCL13O43927 RBM17P2-201ENST00000616397 1405 ntBASIC18.71■□□□□ 0.59
CXCL13O43927 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.71■□□□□ 0.59
CXCL13O43927 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.71■□□□□ 0.59
CXCL13O43927 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CXCL13O43927 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CXCL13O43927 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CXCL13O43927 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CXCL13O43927 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.7■□□□□ 0.58
CXCL13O43927 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CXCL13O43927 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.7■□□□□ 0.58
CXCL13O43927 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CXCL13O43927 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.7■□□□□ 0.58
CXCL13O43927 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CXCL13O43927 AC245052.3-201ENST00000450182 901 ntBASIC18.7■□□□□ 0.58
CXCL13O43927 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.7■□□□□ 0.58
CXCL13O43927 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CXCL13O43927 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.7■□□□□ 0.58
CXCL13O43927 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.7■□□□□ 0.58
CXCL13O43927 AC013268.1-206ENST00000638368 961 ntBASIC18.7■□□□□ 0.58
CXCL13O43927 AC112229.1-201ENST00000639295 961 ntBASIC18.7■□□□□ 0.58
CXCL13O43927 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CXCL13O43927 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CXCL13O43927 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CXCL13O43927 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXCL13O43927 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CXCL13O43927 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.69■□□□□ 0.58
CXCL13O43927 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CXCL13O43927 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.69■□□□□ 0.58
CXCL13O43927 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXCL13O43927 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXCL13O43927 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXCL13O43927 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXCL13O43927 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXCL13O43927 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.69■□□□□ 0.58
CXCL13O43927 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CXCL13O43927 CNN2P6-201ENST00000439038 900 ntBASIC18.69■□□□□ 0.58
CXCL13O43927 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.69■□□□□ 0.58
CXCL13O43927 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CXCL13O43927 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CXCL13O43927 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.69■□□□□ 0.58
CXCL13O43927 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.69■□□□□ 0.58
CXCL13O43927 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXCL13O43927 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXCL13O43927 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXCL13O43927 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXCL13O43927 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.69■□□□□ 0.58
CXCL13O43927 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CXCL13O43927 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CXCL13O43927 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CXCL13O43927 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.68■□□□□ 0.58
CXCL13O43927 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CXCL13O43927 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CXCL13O43927 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CXCL13O43927 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CXCL13O43927 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CXCL13O43927 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CXCL13O43927 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CXCL13O43927 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.68■□□□□ 0.58
CXCL13O43927 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CXCL13O43927 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CXCL13O43927 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CXCL13O43927 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.68■□□□□ 0.58
CXCL13O43927 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CXCL13O43927 AC243732.1-201ENST00000612648 864 ntBASIC18.68■□□□□ 0.58
CXCL13O43927 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CXCL13O43927 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CXCL13O43927 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.68■□□□□ 0.58
CXCL13O43927 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXCL13O43927 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.67■□□□□ 0.58
CXCL13O43927 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CXCL13O43927 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXCL13O43927 MIR663A-201ENST00000385250 93 ntBASIC18.67■□□□□ 0.58
CXCL13O43927 CROCCP5-201ENST00000436658 830 ntBASIC18.67■□□□□ 0.58
CXCL13O43927 AC006970.2-201ENST00000450065 779 ntBASIC18.67■□□□□ 0.58
CXCL13O43927 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CXCL13O43927 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.67■□□□□ 0.58
CXCL13O43927 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.67■□□□□ 0.58
CXCL13O43927 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CXCL13O43927 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CXCL13O43927 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CXCL13O43927 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXCL13O43927 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.66■□□□□ 0.58
CXCL13O43927 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXCL13O43927 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXCL13O43927 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXCL13O43927 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
CXCL13O43927 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.66■□□□□ 0.58
CXCL13O43927 AC005181.1-201ENST00000604782 1256 ntBASIC18.66■□□□□ 0.58
CXCL13O43927 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXCL13O43927 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXCL13O43927 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms