Protein–RNA interactions for Protein: O43657

TSPAN6, Tetraspanin-6, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6O43657 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN6O43657 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
TSPAN6O43657 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN6O43657 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN6O43657 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.87■□□□□ 0.93
TSPAN6O43657 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TSPAN6O43657 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TSPAN6O43657 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.86■□□□□ 0.93
TSPAN6O43657 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
TSPAN6O43657 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TSPAN6O43657 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
TSPAN6O43657 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TSPAN6O43657 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TSPAN6O43657 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.86■□□□□ 0.93
TSPAN6O43657 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.86■□□□□ 0.93
TSPAN6O43657 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.86■□□□□ 0.93
TSPAN6O43657 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.86■□□□□ 0.93
TSPAN6O43657 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
TSPAN6O43657 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TSPAN6O43657 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TSPAN6O43657 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TSPAN6O43657 MKRN4P-201ENST00000444706 1521 ntBASIC20.85■□□□□ 0.93
TSPAN6O43657 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TSPAN6O43657 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.85■□□□□ 0.93
TSPAN6O43657 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
TSPAN6O43657 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TSPAN6O43657 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TSPAN6O43657 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TSPAN6O43657 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.85■□□□□ 0.93
TSPAN6O43657 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TSPAN6O43657 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.85■□□□□ 0.93
TSPAN6O43657 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TSPAN6O43657 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
TSPAN6O43657 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TSPAN6O43657 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TSPAN6O43657 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TSPAN6O43657 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TSPAN6O43657 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TSPAN6O43657 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TSPAN6O43657 AL138781.1-201ENST00000566567 1274 ntBASIC20.84■□□□□ 0.93
TSPAN6O43657 AC016405.3-201ENST00000607710 860 ntBASIC20.84■□□□□ 0.93
TSPAN6O43657 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.84■□□□□ 0.93
TSPAN6O43657 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TSPAN6O43657 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.84■□□□□ 0.93
TSPAN6O43657 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.84■□□□□ 0.93
TSPAN6O43657 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.84■□□□□ 0.93
TSPAN6O43657 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TSPAN6O43657 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TSPAN6O43657 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.93
TSPAN6O43657 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.93
TSPAN6O43657 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
TSPAN6O43657 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TSPAN6O43657 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TSPAN6O43657 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TSPAN6O43657 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TSPAN6O43657 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TSPAN6O43657 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TSPAN6O43657 AC091799.1-201ENST00000422823 811 ntBASIC20.83■□□□□ 0.93
TSPAN6O43657 AC073210.2-201ENST00000430369 194 ntBASIC20.83■□□□□ 0.93
TSPAN6O43657 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.83■□□□□ 0.93
TSPAN6O43657 RARRES2P4-201ENST00000514074 484 ntBASIC20.83■□□□□ 0.93
TSPAN6O43657 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.83■□□□□ 0.93
TSPAN6O43657 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.83■□□□□ 0.92
TSPAN6O43657 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
TSPAN6O43657 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.92
TSPAN6O43657 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TSPAN6O43657 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.82■□□□□ 0.92
TSPAN6O43657 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TSPAN6O43657 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TSPAN6O43657 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TSPAN6O43657 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.82■□□□□ 0.92
TSPAN6O43657 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TSPAN6O43657 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TSPAN6O43657 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TSPAN6O43657 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.82■□□□□ 0.92
TSPAN6O43657 AC093787.1-201ENST00000450396 207 ntBASIC20.82■□□□□ 0.92
TSPAN6O43657 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.82■□□□□ 0.92
TSPAN6O43657 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.82■□□□□ 0.92
TSPAN6O43657 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.82■□□□□ 0.92
TSPAN6O43657 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.82■□□□□ 0.92
TSPAN6O43657 AC133041.1-202ENST00000642053 222 ntBASIC20.82■□□□□ 0.92
TSPAN6O43657 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TSPAN6O43657 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
TSPAN6O43657 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TSPAN6O43657 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TSPAN6O43657 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.82■□□□□ 0.92
TSPAN6O43657 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
TSPAN6O43657 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TSPAN6O43657 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TSPAN6O43657 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TSPAN6O43657 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.81■□□□□ 0.92
TSPAN6O43657 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.81■□□□□ 0.92
TSPAN6O43657 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TSPAN6O43657 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TSPAN6O43657 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TSPAN6O43657 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TSPAN6O43657 MIPEPP3-201ENST00000412105 444 ntBASIC20.81■□□□□ 0.92
TSPAN6O43657 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TSPAN6O43657 AC069152.1-201ENST00000438030 544 ntBASIC20.81■□□□□ 0.92
TSPAN6O43657 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms