Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC091799.1-201ENST00000422823 811 ntBASIC21.16■□□□□ 0.98
SMAD6O43541 AC245052.3-201ENST00000450182 901 ntBASIC21.16■□□□□ 0.98
SMAD6O43541 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.16■□□□□ 0.98
SMAD6O43541 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.16■□□□□ 0.98
SMAD6O43541 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMAD6O43541 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.16■□□□□ 0.98
SMAD6O43541 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.16■□□□□ 0.98
SMAD6O43541 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.16■□□□□ 0.98
SMAD6O43541 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMAD6O43541 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.15■□□□□ 0.98
SMAD6O43541 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SMAD6O43541 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMAD6O43541 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMAD6O43541 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMAD6O43541 GUSBP6-202ENST00000438529 1198 ntBASIC21.15■□□□□ 0.98
SMAD6O43541 AC133552.2-202ENST00000575694 574 ntBASIC21.15■□□□□ 0.98
SMAD6O43541 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.15■□□□□ 0.98
SMAD6O43541 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SMAD6O43541 AL591742.1-201ENST00000604433 565 ntBASIC21.15■□□□□ 0.98
SMAD6O43541 AC016405.3-201ENST00000607710 860 ntBASIC21.15■□□□□ 0.98
SMAD6O43541 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.15■□□□□ 0.98
SMAD6O43541 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
SMAD6O43541 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMAD6O43541 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SMAD6O43541 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SMAD6O43541 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMAD6O43541 Z98882.1-201ENST00000622160 2253 ntBASIC21.15■□□□□ 0.98
SMAD6O43541 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SMAD6O43541 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.14■□□□□ 0.98
SMAD6O43541 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
SMAD6O43541 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SMAD6O43541 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SMAD6O43541 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SMAD6O43541 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SMAD6O43541 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SMAD6O43541 AF201337.1-201ENST00000520239 748 ntBASIC21.14■□□□□ 0.97
SMAD6O43541 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.14■□□□□ 0.97
SMAD6O43541 AC105036.2-201ENST00000569468 176 ntBASIC21.14■□□□□ 0.97
SMAD6O43541 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
SMAD6O43541 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.14■□□□□ 0.97
SMAD6O43541 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SMAD6O43541 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.14■□□□□ 0.97
SMAD6O43541 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMAD6O43541 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SMAD6O43541 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SMAD6O43541 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMAD6O43541 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMAD6O43541 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.14■□□□□ 0.97
SMAD6O43541 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SMAD6O43541 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.13■□□□□ 0.97
SMAD6O43541 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.13■□□□□ 0.97
SMAD6O43541 TSPY6P-201ENST00000448518 926 ntBASIC21.13■□□□□ 0.97
SMAD6O43541 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SMAD6O43541 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.13■□□□□ 0.97
SMAD6O43541 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.13■□□□□ 0.97
SMAD6O43541 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.13■□□□□ 0.97
SMAD6O43541 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMAD6O43541 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SMAD6O43541 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.13■□□□□ 0.97
SMAD6O43541 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.13■□□□□ 0.97
SMAD6O43541 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SMAD6O43541 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SMAD6O43541 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMAD6O43541 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMAD6O43541 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.12■□□□□ 0.97
SMAD6O43541 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.12■□□□□ 0.97
SMAD6O43541 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SMAD6O43541 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SMAD6O43541 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SMAD6O43541 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMAD6O43541 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMAD6O43541 AC093787.1-201ENST00000450396 207 ntBASIC21.12■□□□□ 0.97
SMAD6O43541 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SMAD6O43541 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
SMAD6O43541 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.12■□□□□ 0.97
SMAD6O43541 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMAD6O43541 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMAD6O43541 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMAD6O43541 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMAD6O43541 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SMAD6O43541 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SMAD6O43541 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SMAD6O43541 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.11■□□□□ 0.97
SMAD6O43541 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMAD6O43541 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.11■□□□□ 0.97
SMAD6O43541 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.11■□□□□ 0.97
SMAD6O43541 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.11■□□□□ 0.97
SMAD6O43541 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMAD6O43541 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMAD6O43541 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMAD6O43541 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMAD6O43541 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMAD6O43541 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMAD6O43541 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMAD6O43541 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMAD6O43541 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMAD6O43541 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMAD6O43541 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.1■□□□□ 0.97
SMAD6O43541 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMAD6O43541 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms