Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC25.97■■□□□ 1.75
SRGAP3O43295 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SRGAP3O43295 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SRGAP3O43295 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
SRGAP3O43295 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SRGAP3O43295 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC25.96■■□□□ 1.75
SRGAP3O43295 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SRGAP3O43295 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SRGAP3O43295 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SRGAP3O43295 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
SRGAP3O43295 AC245052.3-201ENST00000450182 901 ntBASIC25.96■■□□□ 1.75
SRGAP3O43295 AC243732.1-201ENST00000612648 864 ntBASIC25.96■■□□□ 1.75
SRGAP3O43295 AC013268.1-206ENST00000638368 961 ntBASIC25.96■■□□□ 1.75
SRGAP3O43295 AC112229.1-201ENST00000639295 961 ntBASIC25.96■■□□□ 1.75
SRGAP3O43295 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SRGAP3O43295 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SRGAP3O43295 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC25.96■■□□□ 1.75
SRGAP3O43295 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SRGAP3O43295 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SRGAP3O43295 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SRGAP3O43295 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC25.95■■□□□ 1.74
SRGAP3O43295 AC026185.1-201ENST00000445748 174 ntBASIC25.95■■□□□ 1.74
SRGAP3O43295 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SRGAP3O43295 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC25.95■■□□□ 1.74
SRGAP3O43295 AC231657.2-201ENST00000624556 255 ntBASIC25.95■■□□□ 1.74
SRGAP3O43295 FEM1AP4-201ENST00000443167 1987 ntBASIC25.95■■□□□ 1.74
SRGAP3O43295 PARN-205ENST00000539279 1557 ntTSL 2 BASIC25.95■■□□□ 1.74
SRGAP3O43295 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SRGAP3O43295 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC25.95■■□□□ 1.74
SRGAP3O43295 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SRGAP3O43295 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
SRGAP3O43295 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC25.94■■□□□ 1.74
SRGAP3O43295 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC25.94■■□□□ 1.74
SRGAP3O43295 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
SRGAP3O43295 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
SRGAP3O43295 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SRGAP3O43295 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC25.94■■□□□ 1.74
SRGAP3O43295 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
SRGAP3O43295 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
SRGAP3O43295 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC25.94■■□□□ 1.74
SRGAP3O43295 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
SRGAP3O43295 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SRGAP3O43295 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SRGAP3O43295 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC25.93■■□□□ 1.74
SRGAP3O43295 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SRGAP3O43295 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SRGAP3O43295 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC25.93■■□□□ 1.74
SRGAP3O43295 AC007322.1-201ENST00000426983 750 ntBASIC25.93■■□□□ 1.74
SRGAP3O43295 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SRGAP3O43295 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC25.93■■□□□ 1.74
SRGAP3O43295 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
SRGAP3O43295 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SRGAP3O43295 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
SRGAP3O43295 AF106564.1-201ENST00000607058 2553 ntBASIC25.93■■□□□ 1.74
SRGAP3O43295 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SRGAP3O43295 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
SRGAP3O43295 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC25.92■■□□□ 1.74
SRGAP3O43295 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
SRGAP3O43295 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
SRGAP3O43295 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC25.92■■□□□ 1.74
SRGAP3O43295 CROCCP5-201ENST00000436658 830 ntBASIC25.92■■□□□ 1.74
SRGAP3O43295 PARP1-210ENST00000629232 477 ntTSL 5 BASIC25.92■■□□□ 1.74
SRGAP3O43295 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC25.92■■□□□ 1.74
SRGAP3O43295 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC25.92■■□□□ 1.74
SRGAP3O43295 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
SRGAP3O43295 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
SRGAP3O43295 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SRGAP3O43295 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SRGAP3O43295 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SRGAP3O43295 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
SRGAP3O43295 AC007322.4-201ENST00000509611 723 ntBASIC25.91■■□□□ 1.74
SRGAP3O43295 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC25.91■■□□□ 1.74
SRGAP3O43295 PLLP-204ENST00000569059 665 ntTSL 3 BASIC25.91■■□□□ 1.74
SRGAP3O43295 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC25.91■■□□□ 1.74
SRGAP3O43295 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
SRGAP3O43295 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
SRGAP3O43295 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SRGAP3O43295 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
SRGAP3O43295 AC007375.3-201ENST00000600936 2314 ntBASIC25.91■■□□□ 1.74
SRGAP3O43295 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SRGAP3O43295 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SRGAP3O43295 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SRGAP3O43295 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SRGAP3O43295 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC25.9■■□□□ 1.74
SRGAP3O43295 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SRGAP3O43295 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
SRGAP3O43295 AC091799.1-201ENST00000422823 811 ntBASIC25.9■■□□□ 1.74
SRGAP3O43295 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC25.9■■□□□ 1.74
SRGAP3O43295 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC25.9■■□□□ 1.74
SRGAP3O43295 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
SRGAP3O43295 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SRGAP3O43295 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
SRGAP3O43295 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
SRGAP3O43295 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
SRGAP3O43295 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC25.89■■□□□ 1.74
SRGAP3O43295 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
SRGAP3O43295 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SRGAP3O43295 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC25.89■■□□□ 1.74
SRGAP3O43295 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
SRGAP3O43295 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC25.89■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms