Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RRP8O43159 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.66■□□□□ 0.74
RRP8O43159 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RRP8O43159 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RRP8O43159 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.66■□□□□ 0.74
RRP8O43159 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RRP8O43159 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RRP8O43159 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.66■□□□□ 0.74
RRP8O43159 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.66■□□□□ 0.74
RRP8O43159 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.66■□□□□ 0.74
RRP8O43159 SOX15-203ENST00000570788 1093 ntBASIC19.66■□□□□ 0.74
RRP8O43159 AC233702.5-201ENST00000584107 538 ntBASIC19.66■□□□□ 0.74
RRP8O43159 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.66■□□□□ 0.74
RRP8O43159 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.66■□□□□ 0.74
RRP8O43159 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
RRP8O43159 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RRP8O43159 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RRP8O43159 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RRP8O43159 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
RRP8O43159 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.65■□□□□ 0.74
RRP8O43159 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RRP8O43159 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.65■□□□□ 0.74
RRP8O43159 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RRP8O43159 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RRP8O43159 RPS2P55-201ENST00000397318 883 ntBASIC19.65■□□□□ 0.74
RRP8O43159 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.65■□□□□ 0.74
RRP8O43159 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RRP8O43159 AC107956.1-201ENST00000494359 873 ntBASIC19.65■□□□□ 0.74
RRP8O43159 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
RRP8O43159 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RRP8O43159 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RRP8O43159 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RRP8O43159 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RRP8O43159 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.64■□□□□ 0.73
RRP8O43159 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.64■□□□□ 0.73
RRP8O43159 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
RRP8O43159 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RRP8O43159 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RRP8O43159 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.64■□□□□ 0.73
RRP8O43159 LINC00526-201ENST00000581067 1875 ntBASIC19.64■□□□□ 0.73
RRP8O43159 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.64■□□□□ 0.73
RRP8O43159 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RRP8O43159 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RRP8O43159 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RRP8O43159 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.63■□□□□ 0.73
RRP8O43159 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RRP8O43159 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.63■□□□□ 0.73
RRP8O43159 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RRP8O43159 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.63■□□□□ 0.73
RRP8O43159 TSPY7P-201ENST00000431358 1114 ntBASIC19.63■□□□□ 0.73
RRP8O43159 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.63■□□□□ 0.73
RRP8O43159 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RRP8O43159 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.63■□□□□ 0.73
RRP8O43159 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RRP8O43159 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.63■□□□□ 0.73
RRP8O43159 AC233263.1-201ENST00000578059 224 ntBASIC19.63■□□□□ 0.73
RRP8O43159 MIR4785-201ENST00000585005 73 ntBASIC19.63■□□□□ 0.73
RRP8O43159 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
RRP8O43159 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.63■□□□□ 0.73
RRP8O43159 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RRP8O43159 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RRP8O43159 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RRP8O43159 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RRP8O43159 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.62■□□□□ 0.73
RRP8O43159 AL135905.2-201ENST00000584934 1404 ntBASIC19.62■□□□□ 0.73
RRP8O43159 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.62■□□□□ 0.73
RRP8O43159 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RRP8O43159 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.62■□□□□ 0.73
RRP8O43159 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.62■□□□□ 0.73
RRP8O43159 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RRP8O43159 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RRP8O43159 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.62■□□□□ 0.73
RRP8O43159 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RRP8O43159 POM121L13P-201ENST00000422362 380 ntBASIC19.62■□□□□ 0.73
RRP8O43159 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.62■□□□□ 0.73
RRP8O43159 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.62■□□□□ 0.73
RRP8O43159 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.62■□□□□ 0.73
RRP8O43159 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.62■□□□□ 0.73
RRP8O43159 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RRP8O43159 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RRP8O43159 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RRP8O43159 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RRP8O43159 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RRP8O43159 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RRP8O43159 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RRP8O43159 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.61■□□□□ 0.73
RRP8O43159 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.61■□□□□ 0.73
RRP8O43159 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RRP8O43159 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RRP8O43159 MCRIP2P1-201ENST00000394346 511 ntBASIC19.61■□□□□ 0.73
RRP8O43159 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.61■□□□□ 0.73
RRP8O43159 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RRP8O43159 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.61■□□□□ 0.73
RRP8O43159 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RRP8O43159 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RRP8O43159 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RRP8O43159 AC079834.2-201ENST00000609776 1949 ntBASIC19.61■□□□□ 0.73
RRP8O43159 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.6■□□□□ 0.73
RRP8O43159 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.6■□□□□ 0.73
RRP8O43159 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms