Protein–RNA interactions for Protein: O15321

TM9SF1, Transmembrane 9 superfamily member 1, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1O15321 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TM9SF1O15321 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TM9SF1O15321 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF1O15321 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.71■□□□□ 0.91
TM9SF1O15321 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
TM9SF1O15321 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF1O15321 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.71■□□□□ 0.91
TM9SF1O15321 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
TM9SF1O15321 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF1O15321 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF1O15321 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TM9SF1O15321 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.71■□□□□ 0.91
TM9SF1O15321 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF1O15321 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.71■□□□□ 0.91
TM9SF1O15321 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF1O15321 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF1O15321 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF1O15321 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF1O15321 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF1O15321 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM9SF1O15321 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM9SF1O15321 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.7■□□□□ 0.9
TM9SF1O15321 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TM9SF1O15321 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
TM9SF1O15321 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.7■□□□□ 0.9
TM9SF1O15321 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM9SF1O15321 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TM9SF1O15321 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.7■□□□□ 0.9
TM9SF1O15321 KRT16P3-201ENST00000439127 1283 ntBASIC20.7■□□□□ 0.9
TM9SF1O15321 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TM9SF1O15321 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TM9SF1O15321 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TM9SF1O15321 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.7■□□□□ 0.9
TM9SF1O15321 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.7■□□□□ 0.9
TM9SF1O15321 AL512408.1-201ENST00000569378 2000 ntBASIC20.7■□□□□ 0.9
TM9SF1O15321 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.7■□□□□ 0.9
TM9SF1O15321 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.69■□□□□ 0.9
TM9SF1O15321 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF1O15321 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF1O15321 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF1O15321 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF1O15321 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF1O15321 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.69■□□□□ 0.9
TM9SF1O15321 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.69■□□□□ 0.9
TM9SF1O15321 AL138724.1-201ENST00000606771 1088 ntBASIC20.69■□□□□ 0.9
TM9SF1O15321 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF1O15321 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF1O15321 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF1O15321 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF1O15321 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF1O15321 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF1O15321 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF1O15321 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.69■□□□□ 0.9
TM9SF1O15321 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF1O15321 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF1O15321 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.69■□□□□ 0.9
TM9SF1O15321 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.68■□□□□ 0.9
TM9SF1O15321 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.68■□□□□ 0.9
TM9SF1O15321 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TM9SF1O15321 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.68■□□□□ 0.9
TM9SF1O15321 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM9SF1O15321 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM9SF1O15321 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM9SF1O15321 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TM9SF1O15321 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TM9SF1O15321 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM9SF1O15321 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TM9SF1O15321 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM9SF1O15321 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM9SF1O15321 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.67■□□□□ 0.9
TM9SF1O15321 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TM9SF1O15321 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM9SF1O15321 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TM9SF1O15321 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.67■□□□□ 0.9
TM9SF1O15321 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM9SF1O15321 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TM9SF1O15321 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TM9SF1O15321 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM9SF1O15321 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM9SF1O15321 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.67■□□□□ 0.9
TM9SF1O15321 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TM9SF1O15321 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TM9SF1O15321 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TM9SF1O15321 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.66■□□□□ 0.9
TM9SF1O15321 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
TM9SF1O15321 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TM9SF1O15321 MIR3621-201ENST00000580529 85 ntBASIC20.66■□□□□ 0.9
TM9SF1O15321 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.66■□□□□ 0.9
TM9SF1O15321 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.66■□□□□ 0.9
TM9SF1O15321 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.66■□□□□ 0.9
TM9SF1O15321 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.66■□□□□ 0.9
TM9SF1O15321 FP700111.2-201ENST00000619190 1892 ntBASIC20.66■□□□□ 0.9
TM9SF1O15321 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.66■□□□□ 0.9
TM9SF1O15321 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.66■□□□□ 0.9
TM9SF1O15321 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TM9SF1O15321 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
TM9SF1O15321 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TM9SF1O15321 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
TM9SF1O15321 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TM9SF1O15321 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms