Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 CYP2T3P-201ENST00000601990 817 ntBASIC23.94■■□□□ 1.42
ATP2A1O14983 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ATP2A1O14983 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ATP2A1O14983 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ATP2A1O14983 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.94■■□□□ 1.42
ATP2A1O14983 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.94■■□□□ 1.42
ATP2A1O14983 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
ATP2A1O14983 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.93■■□□□ 1.42
ATP2A1O14983 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ATP2A1O14983 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ATP2A1O14983 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ATP2A1O14983 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
ATP2A1O14983 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ATP2A1O14983 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ATP2A1O14983 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ATP2A1O14983 LSM12P1-201ENST00000411836 588 ntBASIC23.93■■□□□ 1.42
ATP2A1O14983 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
ATP2A1O14983 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.93■■□□□ 1.42
ATP2A1O14983 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.93■■□□□ 1.42
ATP2A1O14983 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC23.93■■□□□ 1.42
ATP2A1O14983 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.93■■□□□ 1.42
ATP2A1O14983 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC23.93■■□□□ 1.42
ATP2A1O14983 AC008687.6-201ENST00000596318 630 ntBASIC23.93■■□□□ 1.42
ATP2A1O14983 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
ATP2A1O14983 KRT17P1-201ENST00000399211 1546 ntBASIC23.93■■□□□ 1.42
ATP2A1O14983 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.93■■□□□ 1.42
ATP2A1O14983 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.93■■□□□ 1.42
ATP2A1O14983 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.92■■□□□ 1.42
ATP2A1O14983 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ATP2A1O14983 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
ATP2A1O14983 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.92■■□□□ 1.42
ATP2A1O14983 AC242852.2-201ENST00000615738 1807 ntBASIC23.92■■□□□ 1.42
ATP2A1O14983 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ATP2A1O14983 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.92■■□□□ 1.42
ATP2A1O14983 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.92■■□□□ 1.42
ATP2A1O14983 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ATP2A1O14983 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.92■■□□□ 1.42
ATP2A1O14983 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ATP2A1O14983 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ATP2A1O14983 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
ATP2A1O14983 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
ATP2A1O14983 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ATP2A1O14983 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ATP2A1O14983 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ATP2A1O14983 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
ATP2A1O14983 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
ATP2A1O14983 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ATP2A1O14983 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
ATP2A1O14983 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
ATP2A1O14983 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ATP2A1O14983 PRORSD1P-201ENST00000295112 541 ntBASIC23.91■■□□□ 1.42
ATP2A1O14983 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ATP2A1O14983 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
ATP2A1O14983 KRT18P29-201ENST00000397031 1267 ntBASIC23.91■■□□□ 1.42
ATP2A1O14983 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.91■■□□□ 1.42
ATP2A1O14983 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.91■■□□□ 1.42
ATP2A1O14983 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23.91■■□□□ 1.42
ATP2A1O14983 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.91■■□□□ 1.42
ATP2A1O14983 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.91■■□□□ 1.42
ATP2A1O14983 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.91■■□□□ 1.42
ATP2A1O14983 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC23.91■■□□□ 1.42
ATP2A1O14983 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
ATP2A1O14983 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
ATP2A1O14983 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ATP2A1O14983 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
ATP2A1O14983 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.91■■□□□ 1.42
ATP2A1O14983 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.91■■□□□ 1.42
ATP2A1O14983 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
ATP2A1O14983 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
ATP2A1O14983 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.9■■□□□ 1.42
ATP2A1O14983 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ATP2A1O14983 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ATP2A1O14983 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.9■■□□□ 1.42
ATP2A1O14983 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.9■■□□□ 1.42
ATP2A1O14983 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.9■■□□□ 1.42
ATP2A1O14983 MCRIP2P1-201ENST00000394346 511 ntBASIC23.9■■□□□ 1.42
ATP2A1O14983 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ATP2A1O14983 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.9■■□□□ 1.42
ATP2A1O14983 AL355472.2-201ENST00000422958 438 ntBASIC23.9■■□□□ 1.42
ATP2A1O14983 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.9■■□□□ 1.42
ATP2A1O14983 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
ATP2A1O14983 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.9■■□□□ 1.42
ATP2A1O14983 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.9■■□□□ 1.42
ATP2A1O14983 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ATP2A1O14983 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.9■■□□□ 1.42
ATP2A1O14983 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
ATP2A1O14983 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ATP2A1O14983 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
ATP2A1O14983 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
ATP2A1O14983 ESRRAP1-201ENST00000400596 1257 ntBASIC23.89■■□□□ 1.41
ATP2A1O14983 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.89■■□□□ 1.41
ATP2A1O14983 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
ATP2A1O14983 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.89■■□□□ 1.41
ATP2A1O14983 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.89■■□□□ 1.41
ATP2A1O14983 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
ATP2A1O14983 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
ATP2A1O14983 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
ATP2A1O14983 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
ATP2A1O14983 AC012676.1-201ENST00000574705 1949 ntBASIC23.88■■□□□ 1.41
ATP2A1O14983 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms