Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH17O14917 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH17O14917 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PCDH17O14917 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDH17O14917 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH17O14917 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDH17O14917 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH17O14917 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDH17O14917 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH17O14917 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDH17O14917 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH17O14917 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH17O14917 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH17O14917 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH17O14917 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH17O14917 AF106564.1-201ENST00000607058 2553 ntBASIC19.86■□□□□ 0.77
PCDH17O14917 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH17O14917 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.86■□□□□ 0.77
PCDH17O14917 HLA-L-209ENST00000420110 1011 ntBASIC19.86■□□□□ 0.77
PCDH17O14917 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.86■□□□□ 0.77
PCDH17O14917 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDH17O14917 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.86■□□□□ 0.77
PCDH17O14917 RAP2CP1-201ENST00000605103 478 ntBASIC19.86■□□□□ 0.77
PCDH17O14917 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.86■□□□□ 0.77
PCDH17O14917 AC008175.2-201ENST00000612840 297 ntBASIC19.86■□□□□ 0.77
PCDH17O14917 AC120498.10-201ENST00000621827 505 ntBASIC19.86■□□□□ 0.77
PCDH17O14917 AC231657.2-201ENST00000624556 255 ntBASIC19.86■□□□□ 0.77
PCDH17O14917 MYCNOS-205ENST00000641950 531 ntBASIC19.86■□□□□ 0.77
PCDH17O14917 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH17O14917 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH17O14917 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH17O14917 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH17O14917 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH17O14917 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDH17O14917 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH17O14917 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDH17O14917 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDH17O14917 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDH17O14917 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.85■□□□□ 0.77
PCDH17O14917 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDH17O14917 POU5F1P4-201ENST00000413175 1085 ntBASIC19.85■□□□□ 0.77
PCDH17O14917 CDCA4P2-201ENST00000441182 718 ntBASIC19.85■□□□□ 0.77
PCDH17O14917 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.85■□□□□ 0.77
PCDH17O14917 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDH17O14917 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.85■□□□□ 0.77
PCDH17O14917 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDH17O14917 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDH17O14917 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDH17O14917 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDH17O14917 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH17O14917 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDH17O14917 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH17O14917 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.84■□□□□ 0.77
PCDH17O14917 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH17O14917 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH17O14917 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.84■□□□□ 0.77
PCDH17O14917 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PCDH17O14917 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
PCDH17O14917 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.84■□□□□ 0.77
PCDH17O14917 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDH17O14917 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDH17O14917 MFSD11-216ENST00000590393 1141 ntBASIC19.84■□□□□ 0.77
PCDH17O14917 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PCDH17O14917 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDH17O14917 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
PCDH17O14917 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH17O14917 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDH17O14917 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH17O14917 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH17O14917 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PCDH17O14917 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PCDH17O14917 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH17O14917 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH17O14917 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
PCDH17O14917 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
PCDH17O14917 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH17O14917 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH17O14917 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH17O14917 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDH17O14917 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDH17O14917 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDH17O14917 FEM1AP4-201ENST00000443167 1987 ntBASIC19.83■□□□□ 0.77
PCDH17O14917 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PCDH17O14917 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDH17O14917 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDH17O14917 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDH17O14917 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDH17O14917 UBE2DNL-204ENST00000602536 740 ntBASIC19.83■□□□□ 0.77
PCDH17O14917 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PCDH17O14917 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
PCDH17O14917 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDH17O14917 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PCDH17O14917 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
PCDH17O14917 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.83■□□□□ 0.76
PCDH17O14917 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDH17O14917 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH17O14917 AC026471.6-201ENST00000622954 1905 ntBASIC19.82■□□□□ 0.76
PCDH17O14917 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH17O14917 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH17O14917 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms