Protein–RNA interactions for Protein: O00743

PPP6C, Serine/threonine-protein phosphatase 6 catalytic subunit, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6CO00743 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PPP6CO00743 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP6CO00743 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP6CO00743 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP6CO00743 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PPP6CO00743 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP6CO00743 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PPP6CO00743 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PPP6CO00743 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP6CO00743 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.26■□□□□ 0.83
PPP6CO00743 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.26■□□□□ 0.83
PPP6CO00743 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.26■□□□□ 0.83
PPP6CO00743 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PPP6CO00743 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP6CO00743 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP6CO00743 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP6CO00743 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP6CO00743 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.26■□□□□ 0.83
PPP6CO00743 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PPP6CO00743 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP6CO00743 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PPP6CO00743 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP6CO00743 AP005212.1-201ENST00000581547 1997 ntBASIC20.25■□□□□ 0.83
PPP6CO00743 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP6CO00743 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP6CO00743 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.25■□□□□ 0.83
PPP6CO00743 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.25■□□□□ 0.83
PPP6CO00743 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.25■□□□□ 0.83
PPP6CO00743 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
PPP6CO00743 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.25■□□□□ 0.83
PPP6CO00743 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.25■□□□□ 0.83
PPP6CO00743 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.25■□□□□ 0.83
PPP6CO00743 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PPP6CO00743 AL391422.3-201ENST00000603791 2761 ntBASIC20.25■□□□□ 0.83
PPP6CO00743 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP6CO00743 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PPP6CO00743 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PPP6CO00743 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP6CO00743 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP6CO00743 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP6CO00743 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP6CO00743 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP6CO00743 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PPP6CO00743 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP6CO00743 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.24■□□□□ 0.83
PPP6CO00743 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.24■□□□□ 0.83
PPP6CO00743 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP6CO00743 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP6CO00743 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PPP6CO00743 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.24■□□□□ 0.83
PPP6CO00743 AC053503.5-201ENST00000601508 636 ntBASIC20.24■□□□□ 0.83
PPP6CO00743 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP6CO00743 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PPP6CO00743 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PPP6CO00743 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.23■□□□□ 0.83
PPP6CO00743 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPP6CO00743 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPP6CO00743 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PPP6CO00743 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.23■□□□□ 0.83
PPP6CO00743 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.23■□□□□ 0.83
PPP6CO00743 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PPP6CO00743 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.23■□□□□ 0.83
PPP6CO00743 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PPP6CO00743 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PPP6CO00743 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PPP6CO00743 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPP6CO00743 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPP6CO00743 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PPP6CO00743 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP6CO00743 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PPP6CO00743 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP6CO00743 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP6CO00743 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP6CO00743 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP6CO00743 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP6CO00743 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.22■□□□□ 0.83
PPP6CO00743 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.22■□□□□ 0.83
PPP6CO00743 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.22■□□□□ 0.83
PPP6CO00743 AC142381.2-201ENST00000566120 298 ntBASIC20.22■□□□□ 0.83
PPP6CO00743 AL354811.1-201ENST00000610286 706 ntBASIC20.22■□□□□ 0.83
PPP6CO00743 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP6CO00743 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP6CO00743 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PPP6CO00743 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PPP6CO00743 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PPP6CO00743 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP6CO00743 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPP6CO00743 PCDHAC2-203ENST00000615316 3011 ntBASIC20.21■□□□□ 0.83
PPP6CO00743 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PPP6CO00743 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPP6CO00743 AC027702.1-201ENST00000563810 1770 ntBASIC20.21■□□□□ 0.83
PPP6CO00743 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.21■□□□□ 0.83
PPP6CO00743 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.21■□□□□ 0.83
PPP6CO00743 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PPP6CO00743 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPP6CO00743 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.21■□□□□ 0.83
PPP6CO00743 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.21■□□□□ 0.83
PPP6CO00743 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPP6CO00743 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPP6CO00743 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms