Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 AC016405.3-201ENST00000607710 860 ntBASIC20.34■□□□□ 0.85
TAF4O00268 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.34■□□□□ 0.85
TAF4O00268 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.34■□□□□ 0.85
TAF4O00268 AL359736.2-201ENST00000621992 437 ntBASIC20.34■□□□□ 0.85
TAF4O00268 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TAF4O00268 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TAF4O00268 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TAF4O00268 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TAF4O00268 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
TAF4O00268 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TAF4O00268 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TAF4O00268 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TAF4O00268 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TAF4O00268 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
TAF4O00268 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TAF4O00268 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.33■□□□□ 0.85
TAF4O00268 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.33■□□□□ 0.85
TAF4O00268 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
TAF4O00268 LINC01023-201ENST00000606054 436 ntBASIC20.33■□□□□ 0.85
TAF4O00268 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.33■□□□□ 0.85
TAF4O00268 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TAF4O00268 AC004687.1-201ENST00000579003 1625 ntBASIC20.33■□□□□ 0.84
TAF4O00268 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TAF4O00268 AC009237.3-201ENST00000393279 1427 ntBASIC20.33■□□□□ 0.84
TAF4O00268 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
TAF4O00268 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.33■□□□□ 0.84
TAF4O00268 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
TAF4O00268 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TAF4O00268 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TAF4O00268 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TAF4O00268 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TAF4O00268 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.32■□□□□ 0.84
TAF4O00268 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TAF4O00268 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TAF4O00268 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TAF4O00268 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TAF4O00268 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
TAF4O00268 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TAF4O00268 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.32■□□□□ 0.84
TAF4O00268 KRT18P20-201ENST00000548986 1279 ntBASIC20.32■□□□□ 0.84
TAF4O00268 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.32■□□□□ 0.84
TAF4O00268 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.32■□□□□ 0.84
TAF4O00268 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.32■□□□□ 0.84
TAF4O00268 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.32■□□□□ 0.84
TAF4O00268 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TAF4O00268 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TAF4O00268 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.32■□□□□ 0.84
TAF4O00268 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TAF4O00268 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TAF4O00268 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
TAF4O00268 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TAF4O00268 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.32■□□□□ 0.84
TAF4O00268 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TAF4O00268 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TAF4O00268 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TAF4O00268 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.31■□□□□ 0.84
TAF4O00268 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.31■□□□□ 0.84
TAF4O00268 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TAF4O00268 AC091874.3-201ENST00000512672 1195 ntBASIC20.31■□□□□ 0.84
TAF4O00268 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.31■□□□□ 0.84
TAF4O00268 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TAF4O00268 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TAF4O00268 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TAF4O00268 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.31■□□□□ 0.84
TAF4O00268 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
TAF4O00268 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TAF4O00268 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TAF4O00268 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TAF4O00268 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TAF4O00268 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.3■□□□□ 0.84
TAF4O00268 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.3■□□□□ 0.84
TAF4O00268 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TAF4O00268 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.3■□□□□ 0.84
TAF4O00268 UNC93B5-201ENST00000530315 699 ntBASIC20.3■□□□□ 0.84
TAF4O00268 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.3■□□□□ 0.84
TAF4O00268 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.3■□□□□ 0.84
TAF4O00268 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.3■□□□□ 0.84
TAF4O00268 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TAF4O00268 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.3■□□□□ 0.84
TAF4O00268 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TAF4O00268 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.3■□□□□ 0.84
TAF4O00268 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
TAF4O00268 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TAF4O00268 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TAF4O00268 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TAF4O00268 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TAF4O00268 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TAF4O00268 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.29■□□□□ 0.84
TAF4O00268 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TAF4O00268 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TAF4O00268 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TAF4O00268 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TAF4O00268 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
TAF4O00268 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TAF4O00268 MIR718-201ENST00000390190 70 ntBASIC20.29■□□□□ 0.84
TAF4O00268 AC010141.2-201ENST00000452426 721 ntBASIC20.29■□□□□ 0.84
TAF4O00268 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TAF4O00268 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
TAF4O00268 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.29■□□□□ 0.84
TAF4O00268 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms