Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.03■□□□□ 0.96
AP3B1O00203 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
AP3B1O00203 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
AP3B1O00203 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
AP3B1O00203 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP3B1O00203 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
AP3B1O00203 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP3B1O00203 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
AP3B1O00203 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP3B1O00203 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.03■□□□□ 0.96
AP3B1O00203 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.02■□□□□ 0.96
AP3B1O00203 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
AP3B1O00203 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP3B1O00203 AC061975.6-201ENST00000579045 1553 ntBASIC21.02■□□□□ 0.96
AP3B1O00203 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP3B1O00203 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP3B1O00203 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
AP3B1O00203 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP3B1O00203 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
AP3B1O00203 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP3B1O00203 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP3B1O00203 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP3B1O00203 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP3B1O00203 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
AP3B1O00203 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.02■□□□□ 0.96
AP3B1O00203 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.02■□□□□ 0.96
AP3B1O00203 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
AP3B1O00203 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
AP3B1O00203 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
AP3B1O00203 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
AP3B1O00203 KRT16P2-201ENST00000414673 1423 ntBASIC21.02■□□□□ 0.96
AP3B1O00203 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP3B1O00203 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
AP3B1O00203 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
AP3B1O00203 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.01■□□□□ 0.95
AP3B1O00203 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
AP3B1O00203 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
AP3B1O00203 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
AP3B1O00203 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
AP3B1O00203 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
AP3B1O00203 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.01■□□□□ 0.95
AP3B1O00203 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP3B1O00203 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP3B1O00203 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
AP3B1O00203 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.01■□□□□ 0.95
AP3B1O00203 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
AP3B1O00203 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.01■□□□□ 0.95
AP3B1O00203 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.01■□□□□ 0.95
AP3B1O00203 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
AP3B1O00203 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP3B1O00203 PLK5-205ENST00000642079 1969 ntBASIC21.01■□□□□ 0.95
AP3B1O00203 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP3B1O00203 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP3B1O00203 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP3B1O00203 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.01■□□□□ 0.95
AP3B1O00203 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP3B1O00203 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21■□□□□ 0.95
AP3B1O00203 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21■□□□□ 0.95
AP3B1O00203 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
AP3B1O00203 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21■□□□□ 0.95
AP3B1O00203 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21■□□□□ 0.95
AP3B1O00203 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
AP3B1O00203 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21■□□□□ 0.95
AP3B1O00203 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
AP3B1O00203 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
AP3B1O00203 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21■□□□□ 0.95
AP3B1O00203 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
AP3B1O00203 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
AP3B1O00203 LINC01521-201ENST00000504184 1943 ntBASIC21■□□□□ 0.95
AP3B1O00203 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP3B1O00203 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
AP3B1O00203 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP3B1O00203 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.99■□□□□ 0.95
AP3B1O00203 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
AP3B1O00203 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
AP3B1O00203 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP3B1O00203 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP3B1O00203 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP3B1O00203 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP3B1O00203 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.99■□□□□ 0.95
AP3B1O00203 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.99■□□□□ 0.95
AP3B1O00203 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.99■□□□□ 0.95
AP3B1O00203 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.99■□□□□ 0.95
AP3B1O00203 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.99■□□□□ 0.95
AP3B1O00203 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP3B1O00203 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP3B1O00203 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP3B1O00203 AC011484.1-201ENST00000377652 1995 ntBASIC20.99■□□□□ 0.95
AP3B1O00203 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
AP3B1O00203 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP3B1O00203 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.99■□□□□ 0.95
AP3B1O00203 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP3B1O00203 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
AP3B1O00203 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP3B1O00203 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP3B1O00203 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.98■□□□□ 0.95
AP3B1O00203 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP3B1O00203 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP3B1O00203 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP3B1O00203 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms