Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SRRM4A7MD48 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SRRM4A7MD48 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SRRM4A7MD48 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SRRM4A7MD48 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SRRM4A7MD48 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SRRM4A7MD48 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.77■□□□□ 0.28
SRRM4A7MD48 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SRRM4A7MD48 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SRRM4A7MD48 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRRM4A7MD48 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.77■□□□□ 0.28
SRRM4A7MD48 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRRM4A7MD48 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRRM4A7MD48 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SRRM4A7MD48 AC027612.3-201ENST00000413684 1047 ntBASIC16.77■□□□□ 0.28
SRRM4A7MD48 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SRRM4A7MD48 AC079140.4-201ENST00000507448 529 ntBASIC16.77■□□□□ 0.28
SRRM4A7MD48 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.77■□□□□ 0.28
SRRM4A7MD48 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SRRM4A7MD48 AC006128.1-201ENST00000624704 1661 ntBASIC16.77■□□□□ 0.28
SRRM4A7MD48 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SRRM4A7MD48 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.77■□□□□ 0.27
SRRM4A7MD48 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
SRRM4A7MD48 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SRRM4A7MD48 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.77■□□□□ 0.27
SRRM4A7MD48 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
SRRM4A7MD48 AC121338.2-201ENST00000622535 1744 ntBASIC16.76■□□□□ 0.27
SRRM4A7MD48 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SRRM4A7MD48 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SRRM4A7MD48 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRRM4A7MD48 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
SRRM4A7MD48 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SRRM4A7MD48 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRRM4A7MD48 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SRRM4A7MD48 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.76■□□□□ 0.27
SRRM4A7MD48 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SRRM4A7MD48 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.76■□□□□ 0.27
SRRM4A7MD48 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SRRM4A7MD48 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.76■□□□□ 0.27
SRRM4A7MD48 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.76■□□□□ 0.27
SRRM4A7MD48 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.76■□□□□ 0.27
SRRM4A7MD48 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
SRRM4A7MD48 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SRRM4A7MD48 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.76■□□□□ 0.27
SRRM4A7MD48 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRRM4A7MD48 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRRM4A7MD48 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
SRRM4A7MD48 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.76■□□□□ 0.27
SRRM4A7MD48 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRRM4A7MD48 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRRM4A7MD48 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SRRM4A7MD48 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM4A7MD48 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
SRRM4A7MD48 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM4A7MD48 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM4A7MD48 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM4A7MD48 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM4A7MD48 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.75■□□□□ 0.27
SRRM4A7MD48 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SRRM4A7MD48 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
SRRM4A7MD48 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.75■□□□□ 0.27
SRRM4A7MD48 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM4A7MD48 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.75■□□□□ 0.27
SRRM4A7MD48 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM4A7MD48 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.75■□□□□ 0.27
SRRM4A7MD48 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.75■□□□□ 0.27
SRRM4A7MD48 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SRRM4A7MD48 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM4A7MD48 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SRRM4A7MD48 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM4A7MD48 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.75■□□□□ 0.27
SRRM4A7MD48 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SRRM4A7MD48 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.75■□□□□ 0.27
SRRM4A7MD48 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.75■□□□□ 0.27
SRRM4A7MD48 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SRRM4A7MD48 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.75■□□□□ 0.27
SRRM4A7MD48 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM4A7MD48 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM4A7MD48 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM4A7MD48 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM4A7MD48 FEM1AP1-201ENST00000431297 1995 ntBASIC16.75■□□□□ 0.27
SRRM4A7MD48 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM4A7MD48 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRRM4A7MD48 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SRRM4A7MD48 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SRRM4A7MD48 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRRM4A7MD48 AP004607.4-201ENST00000530158 1459 ntBASIC16.74■□□□□ 0.27
SRRM4A7MD48 KRT87P-202ENST00000534226 1464 ntBASIC16.74■□□□□ 0.27
SRRM4A7MD48 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.74■□□□□ 0.27
SRRM4A7MD48 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRRM4A7MD48 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.74■□□□□ 0.27
SRRM4A7MD48 LINC01006-201ENST00000333319 2292 ntBASIC16.74■□□□□ 0.27
SRRM4A7MD48 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRRM4A7MD48 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SRRM4A7MD48 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.74■□□□□ 0.27
SRRM4A7MD48 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.74■□□□□ 0.27
SRRM4A7MD48 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.74■□□□□ 0.27
SRRM4A7MD48 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRRM4A7MD48 AC073130.3-201ENST00000624389 2278 ntBASIC16.73■□□□□ 0.27
SRRM4A7MD48 SLC25A24-204ENST00000569674 2357 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms