Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TMEM88BA6NKF7 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.61■■□□□ 1.53
TMEM88BA6NKF7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
TMEM88BA6NKF7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TMEM88BA6NKF7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TMEM88BA6NKF7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC24.61■■□□□ 1.53
TMEM88BA6NKF7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC24.61■■□□□ 1.53
TMEM88BA6NKF7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
TMEM88BA6NKF7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC24.61■■□□□ 1.53
TMEM88BA6NKF7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TMEM88BA6NKF7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TMEM88BA6NKF7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC24.61■■□□□ 1.53
TMEM88BA6NKF7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
TMEM88BA6NKF7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
TMEM88BA6NKF7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
TMEM88BA6NKF7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TMEM88BA6NKF7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC24.6■■□□□ 1.53
TMEM88BA6NKF7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
TMEM88BA6NKF7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
TMEM88BA6NKF7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
TMEM88BA6NKF7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
TMEM88BA6NKF7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC24.6■■□□□ 1.53
TMEM88BA6NKF7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TMEM88BA6NKF7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC24.6■■□□□ 1.53
TMEM88BA6NKF7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC24.6■■□□□ 1.53
TMEM88BA6NKF7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TMEM88BA6NKF7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
TMEM88BA6NKF7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TMEM88BA6NKF7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
TMEM88BA6NKF7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TMEM88BA6NKF7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TMEM88BA6NKF7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TMEM88BA6NKF7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
TMEM88BA6NKF7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC24.59■■□□□ 1.53
TMEM88BA6NKF7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC24.59■■□□□ 1.53
TMEM88BA6NKF7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TMEM88BA6NKF7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.59■■□□□ 1.53
TMEM88BA6NKF7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC24.59■■□□□ 1.53
TMEM88BA6NKF7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC24.59■■□□□ 1.53
TMEM88BA6NKF7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
TMEM88BA6NKF7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.58■■□□□ 1.53
TMEM88BA6NKF7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.58■■□□□ 1.53
TMEM88BA6NKF7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TMEM88BA6NKF7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TMEM88BA6NKF7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TMEM88BA6NKF7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC24.58■■□□□ 1.53
TMEM88BA6NKF7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC24.58■■□□□ 1.53
TMEM88BA6NKF7 AL355355.2-201ENST00000442321 338 ntBASIC24.58■■□□□ 1.53
TMEM88BA6NKF7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC24.58■■□□□ 1.53
TMEM88BA6NKF7 AC138932.3-201ENST00000567634 1902 ntBASIC24.58■■□□□ 1.53
TMEM88BA6NKF7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC24.58■■□□□ 1.53
TMEM88BA6NKF7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TMEM88BA6NKF7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
TMEM88BA6NKF7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
TMEM88BA6NKF7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.57■■□□□ 1.52
TMEM88BA6NKF7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TMEM88BA6NKF7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TMEM88BA6NKF7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TMEM88BA6NKF7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC24.57■■□□□ 1.52
TMEM88BA6NKF7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC24.57■■□□□ 1.52
TMEM88BA6NKF7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
TMEM88BA6NKF7 AC120498.8-201ENST00000614275 531 ntBASIC24.57■■□□□ 1.52
TMEM88BA6NKF7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC24.57■■□□□ 1.52
TMEM88BA6NKF7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TMEM88BA6NKF7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
TMEM88BA6NKF7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TMEM88BA6NKF7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TMEM88BA6NKF7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TMEM88BA6NKF7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC24.56■■□□□ 1.52
TMEM88BA6NKF7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
TMEM88BA6NKF7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TMEM88BA6NKF7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TMEM88BA6NKF7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TMEM88BA6NKF7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC24.56■■□□□ 1.52
TMEM88BA6NKF7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
TMEM88BA6NKF7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
TMEM88BA6NKF7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
TMEM88BA6NKF7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TMEM88BA6NKF7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC24.56■■□□□ 1.52
TMEM88BA6NKF7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TMEM88BA6NKF7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.55■■□□□ 1.52
TMEM88BA6NKF7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TMEM88BA6NKF7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TMEM88BA6NKF7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
TMEM88BA6NKF7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TMEM88BA6NKF7 NTF6B-201ENST00000591913 560 ntBASIC24.55■■□□□ 1.52
TMEM88BA6NKF7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TMEM88BA6NKF7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TMEM88BA6NKF7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
TMEM88BA6NKF7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TMEM88BA6NKF7 AC113347.1-201ENST00000413321 391 ntBASIC24.54■■□□□ 1.52
TMEM88BA6NKF7 SAPCD2P4-201ENST00000424595 1171 ntBASIC24.54■■□□□ 1.52
TMEM88BA6NKF7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC24.54■■□□□ 1.52
TMEM88BA6NKF7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC24.54■■□□□ 1.52
TMEM88BA6NKF7 KRT18P57-201ENST00000443599 1254 ntBASIC24.54■■□□□ 1.52
TMEM88BA6NKF7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
TMEM88BA6NKF7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC24.54■■□□□ 1.52
TMEM88BA6NKF7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
TMEM88BA6NKF7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC24.54■■□□□ 1.52
TMEM88BA6NKF7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms