Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01546A6NGU7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01546A6NGU7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC01546A6NGU7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC14.78□□□□□ -0.04
LINC01546A6NGU7 Z92544.1-202ENST00000571933 1220 ntBASIC14.78□□□□□ -0.04
LINC01546A6NGU7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01546A6NGU7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01546A6NGU7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01546A6NGU7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01546A6NGU7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01546A6NGU7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01546A6NGU7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01546A6NGU7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC01546A6NGU7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01546A6NGU7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC14.77□□□□□ -0.04
LINC01546A6NGU7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01546A6NGU7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01546A6NGU7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01546A6NGU7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01546A6NGU7 MIR4449-201ENST00000578365 66 ntBASIC14.77□□□□□ -0.05
LINC01546A6NGU7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01546A6NGU7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01546A6NGU7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC14.77□□□□□ -0.05
LINC01546A6NGU7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01546A6NGU7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
LINC01546A6NGU7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC14.77□□□□□ -0.05
LINC01546A6NGU7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01546A6NGU7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01546A6NGU7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LINC01546A6NGU7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01546A6NGU7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01546A6NGU7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01546A6NGU7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
LINC01546A6NGU7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LINC01546A6NGU7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
LINC01546A6NGU7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01546A6NGU7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01546A6NGU7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LINC01546A6NGU7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01546A6NGU7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01546A6NGU7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC14.76□□□□□ -0.05
LINC01546A6NGU7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC14.76□□□□□ -0.05
LINC01546A6NGU7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC01546A6NGU7 AC087239.1-201ENST00000622671 572 ntBASIC14.76□□□□□ -0.05
LINC01546A6NGU7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC14.76□□□□□ -0.05
LINC01546A6NGU7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01546A6NGU7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01546A6NGU7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC14.76□□□□□ -0.05
LINC01546A6NGU7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01546A6NGU7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01546A6NGU7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01546A6NGU7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01546A6NGU7 AC004408.2-201ENST00000623613 2777 ntBASIC14.75□□□□□ -0.05
LINC01546A6NGU7 AC005332.7-201ENST00000614046 2005 ntBASIC14.75□□□□□ -0.05
LINC01546A6NGU7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01546A6NGU7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC14.75□□□□□ -0.05
LINC01546A6NGU7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01546A6NGU7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01546A6NGU7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01546A6NGU7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01546A6NGU7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC14.75□□□□□ -0.05
LINC01546A6NGU7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LINC01546A6NGU7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01546A6NGU7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01546A6NGU7 AC133637.1-201ENST00000624115 1537 ntBASIC14.75□□□□□ -0.05
LINC01546A6NGU7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01546A6NGU7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01546A6NGU7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.75□□□□□ -0.05
LINC01546A6NGU7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
LINC01546A6NGU7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01546A6NGU7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC14.75□□□□□ -0.05
LINC01546A6NGU7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01546A6NGU7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01546A6NGU7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01546A6NGU7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01546A6NGU7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC14.74□□□□□ -0.05
LINC01546A6NGU7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01546A6NGU7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01546A6NGU7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01546A6NGU7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC14.74□□□□□ -0.05
LINC01546A6NGU7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01546A6NGU7 AC010141.3-201ENST00000456659 717 ntBASIC14.74□□□□□ -0.05
LINC01546A6NGU7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01546A6NGU7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC14.74□□□□□ -0.05
LINC01546A6NGU7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC14.74□□□□□ -0.05
LINC01546A6NGU7 AL451085.2-201ENST00000605085 799 ntBASIC14.74□□□□□ -0.05
LINC01546A6NGU7 AL158211.5-201ENST00000623583 2518 ntBASIC14.74□□□□□ -0.05
LINC01546A6NGU7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LINC01546A6NGU7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LINC01546A6NGU7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01546A6NGU7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
LINC01546A6NGU7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
LINC01546A6NGU7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01546A6NGU7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
LINC01546A6NGU7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC14.73□□□□□ -0.05
LINC01546A6NGU7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC14.73□□□□□ -0.05
LINC01546A6NGU7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01546A6NGU7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01546A6NGU7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LINC01546A6NGU7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms