Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF25A6NGN4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEF25A6NGN4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEF25A6NGN4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEF25A6NGN4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEF25A6NGN4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.55■□□□□ 0.72
PRAMEF25A6NGN4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEF25A6NGN4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.55■□□□□ 0.72
PRAMEF25A6NGN4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEF25A6NGN4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEF25A6NGN4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.55■□□□□ 0.72
PRAMEF25A6NGN4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.55■□□□□ 0.72
PRAMEF25A6NGN4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEF25A6NGN4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEF25A6NGN4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEF25A6NGN4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
PRAMEF25A6NGN4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PRAMEF25A6NGN4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF25A6NGN4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF25A6NGN4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.54■□□□□ 0.72
PRAMEF25A6NGN4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF25A6NGN4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF25A6NGN4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF25A6NGN4 FEM1AP1-201ENST00000431297 1995 ntBASIC19.54■□□□□ 0.72
PRAMEF25A6NGN4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PRAMEF25A6NGN4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF25A6NGN4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.54■□□□□ 0.72
PRAMEF25A6NGN4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF25A6NGN4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.54■□□□□ 0.72
PRAMEF25A6NGN4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF25A6NGN4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.54■□□□□ 0.72
PRAMEF25A6NGN4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF25A6NGN4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.53■□□□□ 0.72
PRAMEF25A6NGN4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
PRAMEF25A6NGN4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PRAMEF25A6NGN4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
PRAMEF25A6NGN4 AL162430.1-201ENST00000480705 870 ntBASIC19.53■□□□□ 0.72
PRAMEF25A6NGN4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.53■□□□□ 0.72
PRAMEF25A6NGN4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
PRAMEF25A6NGN4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.53■□□□□ 0.72
PRAMEF25A6NGN4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF25A6NGN4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.53■□□□□ 0.72
PRAMEF25A6NGN4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF25A6NGN4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF25A6NGN4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF25A6NGN4 KRT87P-202ENST00000534226 1464 ntBASIC19.53■□□□□ 0.72
PRAMEF25A6NGN4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF25A6NGN4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.53■□□□□ 0.72
PRAMEF25A6NGN4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF25A6NGN4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEF25A6NGN4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.52■□□□□ 0.72
PRAMEF25A6NGN4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEF25A6NGN4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.52■□□□□ 0.72
PRAMEF25A6NGN4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.52■□□□□ 0.72
PRAMEF25A6NGN4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.52■□□□□ 0.72
PRAMEF25A6NGN4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEF25A6NGN4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEF25A6NGN4 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.52■□□□□ 0.72
PRAMEF25A6NGN4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.52■□□□□ 0.72
PRAMEF25A6NGN4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.52■□□□□ 0.72
PRAMEF25A6NGN4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.52■□□□□ 0.72
PRAMEF25A6NGN4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PRAMEF25A6NGN4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEF25A6NGN4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.52■□□□□ 0.72
PRAMEF25A6NGN4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEF25A6NGN4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.52■□□□□ 0.72
PRAMEF25A6NGN4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEF25A6NGN4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
PRAMEF25A6NGN4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PRAMEF25A6NGN4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PRAMEF25A6NGN4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.52■□□□□ 0.71
PRAMEF25A6NGN4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PRAMEF25A6NGN4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PRAMEF25A6NGN4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF25A6NGN4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF25A6NGN4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PRAMEF25A6NGN4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.51■□□□□ 0.71
PRAMEF25A6NGN4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.51■□□□□ 0.71
PRAMEF25A6NGN4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.51■□□□□ 0.71
PRAMEF25A6NGN4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF25A6NGN4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.51■□□□□ 0.71
PRAMEF25A6NGN4 NTF6G-201ENST00000591094 616 ntBASIC19.51■□□□□ 0.71
PRAMEF25A6NGN4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.51■□□□□ 0.71
PRAMEF25A6NGN4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PRAMEF25A6NGN4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PRAMEF25A6NGN4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF25A6NGN4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
PRAMEF25A6NGN4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF25A6NGN4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF25A6NGN4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
PRAMEF25A6NGN4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF25A6NGN4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF25A6NGN4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.51■□□□□ 0.71
PRAMEF25A6NGN4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF25A6NGN4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PRAMEF25A6NGN4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRAMEF25A6NGN4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.5■□□□□ 0.71
PRAMEF25A6NGN4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.5■□□□□ 0.71
PRAMEF25A6NGN4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRAMEF25A6NGN4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms