Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.47■□□□□ 0.23
RBFOX3A6NFN3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RBFOX3A6NFN3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.47■□□□□ 0.23
RBFOX3A6NFN3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.47■□□□□ 0.23
RBFOX3A6NFN3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RBFOX3A6NFN3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RBFOX3A6NFN3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RBFOX3A6NFN3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RBFOX3A6NFN3 LETM1P2-201ENST00000597330 2178 ntBASIC16.47■□□□□ 0.23
RBFOX3A6NFN3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
RBFOX3A6NFN3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RBFOX3A6NFN3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RBFOX3A6NFN3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.46■□□□□ 0.23
RBFOX3A6NFN3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX3A6NFN3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RBFOX3A6NFN3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX3A6NFN3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX3A6NFN3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX3A6NFN3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RBFOX3A6NFN3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RBFOX3A6NFN3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX3A6NFN3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX3A6NFN3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC16.46■□□□□ 0.23
RBFOX3A6NFN3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RBFOX3A6NFN3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RBFOX3A6NFN3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
RBFOX3A6NFN3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RBFOX3A6NFN3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX3A6NFN3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX3A6NFN3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX3A6NFN3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.46■□□□□ 0.23
RBFOX3A6NFN3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RBFOX3A6NFN3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBFOX3A6NFN3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.46■□□□□ 0.22
RBFOX3A6NFN3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.46■□□□□ 0.22
RBFOX3A6NFN3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RBFOX3A6NFN3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX3A6NFN3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX3A6NFN3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.45■□□□□ 0.22
RBFOX3A6NFN3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX3A6NFN3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX3A6NFN3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX3A6NFN3 AC099778.1-201ENST00000568593 1911 ntBASIC16.45■□□□□ 0.22
RBFOX3A6NFN3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RBFOX3A6NFN3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX3A6NFN3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX3A6NFN3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX3A6NFN3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.45■□□□□ 0.22
RBFOX3A6NFN3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX3A6NFN3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
RBFOX3A6NFN3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
RBFOX3A6NFN3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RBFOX3A6NFN3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX3A6NFN3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX3A6NFN3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.45■□□□□ 0.22
RBFOX3A6NFN3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.45■□□□□ 0.22
RBFOX3A6NFN3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX3A6NFN3 AL512408.1-201ENST00000569378 2000 ntBASIC16.45■□□□□ 0.22
RBFOX3A6NFN3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX3A6NFN3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBFOX3A6NFN3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RBFOX3A6NFN3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RBFOX3A6NFN3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RBFOX3A6NFN3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RBFOX3A6NFN3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RBFOX3A6NFN3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC16.44■□□□□ 0.22
RBFOX3A6NFN3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.44■□□□□ 0.22
RBFOX3A6NFN3 SPCS2P3-201ENST00000500401 656 ntBASIC16.44■□□□□ 0.22
RBFOX3A6NFN3 HSD17B1P1-201ENST00000590052 955 ntBASIC16.44■□□□□ 0.22
RBFOX3A6NFN3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.44■□□□□ 0.22
RBFOX3A6NFN3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RBFOX3A6NFN3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RBFOX3A6NFN3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RBFOX3A6NFN3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RBFOX3A6NFN3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
RBFOX3A6NFN3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.44■□□□□ 0.22
RBFOX3A6NFN3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RBFOX3A6NFN3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RBFOX3A6NFN3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.44■□□□□ 0.22
RBFOX3A6NFN3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RBFOX3A6NFN3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RBFOX3A6NFN3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.43■□□□□ 0.22
RBFOX3A6NFN3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RBFOX3A6NFN3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
RBFOX3A6NFN3 AC007225.1-201ENST00000566331 1836 ntBASIC16.43■□□□□ 0.22
RBFOX3A6NFN3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
RBFOX3A6NFN3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RBFOX3A6NFN3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
RBFOX3A6NFN3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RBFOX3A6NFN3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RBFOX3A6NFN3 AC079089.2-201ENST00000531211 1277 ntBASIC16.43■□□□□ 0.22
RBFOX3A6NFN3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC16.43■□□□□ 0.22
RBFOX3A6NFN3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.43■□□□□ 0.22
RBFOX3A6NFN3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RBFOX3A6NFN3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.43■□□□□ 0.22
RBFOX3A6NFN3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RBFOX3A6NFN3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RBFOX3A6NFN3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.43■□□□□ 0.22
RBFOX3A6NFN3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.43■□□□□ 0.22
RBFOX3A6NFN3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms