Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.16■□□□□ 0.82
CNOT1A5YKK6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT1A5YKK6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
CNOT1A5YKK6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.16■□□□□ 0.82
CNOT1A5YKK6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT1A5YKK6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT1A5YKK6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT1A5YKK6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CNOT1A5YKK6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT1A5YKK6 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.15■□□□□ 0.82
CNOT1A5YKK6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.15■□□□□ 0.82
CNOT1A5YKK6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT1A5YKK6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT1A5YKK6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT1A5YKK6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT1A5YKK6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT1A5YKK6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT1A5YKK6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.15■□□□□ 0.82
CNOT1A5YKK6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT1A5YKK6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CNOT1A5YKK6 KRT18P57-201ENST00000443599 1254 ntBASIC20.15■□□□□ 0.82
CNOT1A5YKK6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.15■□□□□ 0.82
CNOT1A5YKK6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT1A5YKK6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.15■□□□□ 0.82
CNOT1A5YKK6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CNOT1A5YKK6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.14■□□□□ 0.82
CNOT1A5YKK6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT1A5YKK6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT1A5YKK6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT1A5YKK6 AC113347.1-201ENST00000413321 391 ntBASIC20.14■□□□□ 0.81
CNOT1A5YKK6 PRKY-204ENST00000533551 1019 ntBASIC20.14■□□□□ 0.81
CNOT1A5YKK6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.14■□□□□ 0.81
CNOT1A5YKK6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.14■□□□□ 0.81
CNOT1A5YKK6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT1A5YKK6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT1A5YKK6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT1A5YKK6 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT1A5YKK6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT1A5YKK6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.13■□□□□ 0.81
CNOT1A5YKK6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.13■□□□□ 0.81
CNOT1A5YKK6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.13■□□□□ 0.81
CNOT1A5YKK6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.13■□□□□ 0.81
CNOT1A5YKK6 AC145285.6-201ENST00000604632 637 ntBASIC20.13■□□□□ 0.81
CNOT1A5YKK6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT1A5YKK6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.13■□□□□ 0.81
CNOT1A5YKK6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT1A5YKK6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT1A5YKK6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT1A5YKK6 AC113410.3-201ENST00000623366 203 ntBASIC20.13■□□□□ 0.81
CNOT1A5YKK6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.13■□□□□ 0.81
CNOT1A5YKK6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.13■□□□□ 0.81
CNOT1A5YKK6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNOT1A5YKK6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNOT1A5YKK6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CNOT1A5YKK6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CNOT1A5YKK6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CNOT1A5YKK6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.12■□□□□ 0.81
CNOT1A5YKK6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNOT1A5YKK6 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.12■□□□□ 0.81
CNOT1A5YKK6 AC120498.8-201ENST00000614275 531 ntBASIC20.12■□□□□ 0.81
CNOT1A5YKK6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNOT1A5YKK6 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.12■□□□□ 0.81
CNOT1A5YKK6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
CNOT1A5YKK6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CNOT1A5YKK6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.12■□□□□ 0.81
CNOT1A5YKK6 KRT8P9-201ENST00000558927 1449 ntBASIC20.12■□□□□ 0.81
CNOT1A5YKK6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNOT1A5YKK6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.12■□□□□ 0.81
CNOT1A5YKK6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CNOT1A5YKK6 AC061975.6-201ENST00000579045 1553 ntBASIC20.11■□□□□ 0.81
CNOT1A5YKK6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNOT1A5YKK6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.11■□□□□ 0.81
CNOT1A5YKK6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.11■□□□□ 0.81
CNOT1A5YKK6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNOT1A5YKK6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.11■□□□□ 0.81
CNOT1A5YKK6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.11■□□□□ 0.81
CNOT1A5YKK6 MIR6786-201ENST00000616843 113 ntBASIC20.11■□□□□ 0.81
CNOT1A5YKK6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNOT1A5YKK6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.11■□□□□ 0.81
CNOT1A5YKK6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.11■□□□□ 0.81
CNOT1A5YKK6 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CNOT1A5YKK6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CNOT1A5YKK6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT1A5YKK6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT1A5YKK6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.1■□□□□ 0.81
CNOT1A5YKK6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CNOT1A5YKK6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.1■□□□□ 0.81
CNOT1A5YKK6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.1■□□□□ 0.81
CNOT1A5YKK6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.1■□□□□ 0.81
CNOT1A5YKK6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CNOT1A5YKK6 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.1■□□□□ 0.81
CNOT1A5YKK6 LINC01124-201ENST00000409786 2117 ntBASIC20.1■□□□□ 0.81
CNOT1A5YKK6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.1■□□□□ 0.81
CNOT1A5YKK6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT1A5YKK6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
CNOT1A5YKK6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT1A5YKK6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CNOT1A5YKK6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CNOT1A5YKK6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT1A5YKK6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms