Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21■□□□□ 0.95
TCRBV9S1A1TA0A576 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21■□□□□ 0.95
TCRBV9S1A1TA0A576 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21■□□□□ 0.95
TCRBV9S1A1TA0A576 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TCRBV9S1A1TA0A576 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TCRBV9S1A1TA0A576 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21■□□□□ 0.95
TCRBV9S1A1TA0A576 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.99■□□□□ 0.95
TCRBV9S1A1TA0A576 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TCRBV9S1A1TA0A576 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.99■□□□□ 0.95
TCRBV9S1A1TA0A576 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TCRBV9S1A1TA0A576 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TCRBV9S1A1TA0A576 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TCRBV9S1A1TA0A576 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TCRBV9S1A1TA0A576 AC099791.1-201ENST00000416440 715 ntBASIC20.99■□□□□ 0.95
TCRBV9S1A1TA0A576 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.99■□□□□ 0.95
TCRBV9S1A1TA0A576 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TCRBV9S1A1TA0A576 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TCRBV9S1A1TA0A576 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TCRBV9S1A1TA0A576 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.99■□□□□ 0.95
TCRBV9S1A1TA0A576 TSPY26P-201ENST00000476365 1326 ntBASIC20.99■□□□□ 0.95
TCRBV9S1A1TA0A576 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TCRBV9S1A1TA0A576 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
TCRBV9S1A1TA0A576 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.99■□□□□ 0.95
TCRBV9S1A1TA0A576 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TCRBV9S1A1TA0A576 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TCRBV9S1A1TA0A576 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TCRBV9S1A1TA0A576 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TCRBV9S1A1TA0A576 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TCRBV9S1A1TA0A576 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TCRBV9S1A1TA0A576 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TCRBV9S1A1TA0A576 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.98■□□□□ 0.95
TCRBV9S1A1TA0A576 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
TCRBV9S1A1TA0A576 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TCRBV9S1A1TA0A576 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.98■□□□□ 0.95
TCRBV9S1A1TA0A576 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.98■□□□□ 0.95
TCRBV9S1A1TA0A576 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.98■□□□□ 0.95
TCRBV9S1A1TA0A576 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TCRBV9S1A1TA0A576 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.98■□□□□ 0.95
TCRBV9S1A1TA0A576 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
TCRBV9S1A1TA0A576 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TCRBV9S1A1TA0A576 AL391422.3-201ENST00000603791 2761 ntBASIC20.98■□□□□ 0.95
TCRBV9S1A1TA0A576 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.98■□□□□ 0.95
TCRBV9S1A1TA0A576 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TCRBV9S1A1TA0A576 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.98■□□□□ 0.95
TCRBV9S1A1TA0A576 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TCRBV9S1A1TA0A576 BX005040.4-201ENST00000637145 1518 ntBASIC20.98■□□□□ 0.95
TCRBV9S1A1TA0A576 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.98■□□□□ 0.95
TCRBV9S1A1TA0A576 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.98■□□□□ 0.95
TCRBV9S1A1TA0A576 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TCRBV9S1A1TA0A576 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.97■□□□□ 0.95
TCRBV9S1A1TA0A576 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TCRBV9S1A1TA0A576 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TCRBV9S1A1TA0A576 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TCRBV9S1A1TA0A576 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.97■□□□□ 0.95
TCRBV9S1A1TA0A576 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.97■□□□□ 0.95
TCRBV9S1A1TA0A576 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TCRBV9S1A1TA0A576 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.97■□□□□ 0.95
TCRBV9S1A1TA0A576 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
TCRBV9S1A1TA0A576 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.97■□□□□ 0.95
TCRBV9S1A1TA0A576 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.97■□□□□ 0.95
TCRBV9S1A1TA0A576 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TCRBV9S1A1TA0A576 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TCRBV9S1A1TA0A576 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TCRBV9S1A1TA0A576 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TCRBV9S1A1TA0A576 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.97■□□□□ 0.95
TCRBV9S1A1TA0A576 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.97■□□□□ 0.95
TCRBV9S1A1TA0A576 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TCRBV9S1A1TA0A576 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TCRBV9S1A1TA0A576 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TCRBV9S1A1TA0A576 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV9S1A1TA0A576 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV9S1A1TA0A576 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV9S1A1TA0A576 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TCRBV9S1A1TA0A576 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.96■□□□□ 0.95
TCRBV9S1A1TA0A576 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.96■□□□□ 0.95
TCRBV9S1A1TA0A576 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV9S1A1TA0A576 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV9S1A1TA0A576 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
TCRBV9S1A1TA0A576 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV9S1A1TA0A576 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
TCRBV9S1A1TA0A576 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV9S1A1TA0A576 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV9S1A1TA0A576 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.96■□□□□ 0.95
TCRBV9S1A1TA0A576 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
TCRBV9S1A1TA0A576 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV9S1A1TA0A576 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
TCRBV9S1A1TA0A576 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TCRBV9S1A1TA0A576 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
TCRBV9S1A1TA0A576 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.95■□□□□ 0.94
TCRBV9S1A1TA0A576 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.95■□□□□ 0.94
TCRBV9S1A1TA0A576 AC027682.1-201ENST00000562846 899 ntBASIC20.95■□□□□ 0.94
TCRBV9S1A1TA0A576 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.95■□□□□ 0.94
TCRBV9S1A1TA0A576 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.95■□□□□ 0.94
TCRBV9S1A1TA0A576 AC020907.5-201ENST00000624372 1936 ntBASIC20.95■□□□□ 0.94
TCRBV9S1A1TA0A576 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TCRBV9S1A1TA0A576 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TCRBV9S1A1TA0A576 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TCRBV9S1A1TA0A576 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TCRBV9S1A1TA0A576 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TCRBV9S1A1TA0A576 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms