Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RNF103-CHMP3A0A140T963 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF103-CHMP3A0A140T963 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF103-CHMP3A0A140T963 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF103-CHMP3A0A140T963 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RNF103-CHMP3A0A140T963 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF103-CHMP3A0A140T963 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
RNF103-CHMP3A0A140T963 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF103-CHMP3A0A140T963 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF103-CHMP3A0A140T963 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RNF103-CHMP3A0A140T963 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF103-CHMP3A0A140T963 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF103-CHMP3A0A140T963 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF103-CHMP3A0A140T963 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF103-CHMP3A0A140T963 AC008406.3-201ENST00000620001 1374 ntBASIC19.99■□□□□ 0.79
RNF103-CHMP3A0A140T963 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF103-CHMP3A0A140T963 AC003102.1-202ENST00000563394 1796 ntBASIC19.99■□□□□ 0.79
RNF103-CHMP3A0A140T963 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
RNF103-CHMP3A0A140T963 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.99■□□□□ 0.79
RNF103-CHMP3A0A140T963 AC126544.1-201ENST00000580842 1059 ntBASIC19.99■□□□□ 0.79
RNF103-CHMP3A0A140T963 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF103-CHMP3A0A140T963 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF103-CHMP3A0A140T963 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF103-CHMP3A0A140T963 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF103-CHMP3A0A140T963 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF103-CHMP3A0A140T963 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RNF103-CHMP3A0A140T963 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RNF103-CHMP3A0A140T963 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF103-CHMP3A0A140T963 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF103-CHMP3A0A140T963 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF103-CHMP3A0A140T963 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF103-CHMP3A0A140T963 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF103-CHMP3A0A140T963 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF103-CHMP3A0A140T963 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF103-CHMP3A0A140T963 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.98■□□□□ 0.79
RNF103-CHMP3A0A140T963 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF103-CHMP3A0A140T963 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF103-CHMP3A0A140T963 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RNF103-CHMP3A0A140T963 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF103-CHMP3A0A140T963 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
RNF103-CHMP3A0A140T963 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
RNF103-CHMP3A0A140T963 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF103-CHMP3A0A140T963 AP006587.3-201ENST00000525742 1516 ntBASIC19.97■□□□□ 0.79
RNF103-CHMP3A0A140T963 AC138932.1-201ENST00000534164 6830 ntBASIC19.97■□□□□ 0.79
RNF103-CHMP3A0A140T963 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF103-CHMP3A0A140T963 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF103-CHMP3A0A140T963 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF103-CHMP3A0A140T963 AC133561.4-201ENST00000566112 224 ntBASIC19.97■□□□□ 0.79
RNF103-CHMP3A0A140T963 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.97■□□□□ 0.79
RNF103-CHMP3A0A140T963 SMUG1P1-201ENST00000590640 811 ntBASIC19.97■□□□□ 0.79
RNF103-CHMP3A0A140T963 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF103-CHMP3A0A140T963 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF103-CHMP3A0A140T963 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RNF103-CHMP3A0A140T963 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF103-CHMP3A0A140T963 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF103-CHMP3A0A140T963 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF103-CHMP3A0A140T963 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF103-CHMP3A0A140T963 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF103-CHMP3A0A140T963 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RNF103-CHMP3A0A140T963 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF103-CHMP3A0A140T963 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF103-CHMP3A0A140T963 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF103-CHMP3A0A140T963 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF103-CHMP3A0A140T963 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF103-CHMP3A0A140T963 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF103-CHMP3A0A140T963 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF103-CHMP3A0A140T963 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF103-CHMP3A0A140T963 AC096631.2-201ENST00000436136 790 ntBASIC19.96■□□□□ 0.79
RNF103-CHMP3A0A140T963 IGHV3-19-201ENST00000521488 291 ntBASIC19.96■□□□□ 0.79
RNF103-CHMP3A0A140T963 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF103-CHMP3A0A140T963 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF103-CHMP3A0A140T963 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF103-CHMP3A0A140T963 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF103-CHMP3A0A140T963 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF103-CHMP3A0A140T963 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF103-CHMP3A0A140T963 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF103-CHMP3A0A140T963 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF103-CHMP3A0A140T963 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF103-CHMP3A0A140T963 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF103-CHMP3A0A140T963 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF103-CHMP3A0A140T963 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.96■□□□□ 0.79
RNF103-CHMP3A0A140T963 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF103-CHMP3A0A140T963 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF103-CHMP3A0A140T963 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF103-CHMP3A0A140T963 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RNF103-CHMP3A0A140T963 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF103-CHMP3A0A140T963 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF103-CHMP3A0A140T963 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF103-CHMP3A0A140T963 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF103-CHMP3A0A140T963 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
RNF103-CHMP3A0A140T963 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF103-CHMP3A0A140T963 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF103-CHMP3A0A140T963 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF103-CHMP3A0A140T963 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF103-CHMP3A0A140T963 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF103-CHMP3A0A140T963 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF103-CHMP3A0A140T963 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF103-CHMP3A0A140T963 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
RNF103-CHMP3A0A140T963 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF103-CHMP3A0A140T963 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms