Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV34A0A0B4J273 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAV34A0A0B4J273 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TRAV34A0A0B4J273 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 AC073314.1-201ENST00000568729 2216 ntBASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 AFG3L1P-217ENST00000557444 2447 ntBASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV34A0A0B4J273 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV34A0A0B4J273 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
TRAV34A0A0B4J273 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV34A0A0B4J273 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
TRAV34A0A0B4J273 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV34A0A0B4J273 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV34A0A0B4J273 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV34A0A0B4J273 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV34A0A0B4J273 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV34A0A0B4J273 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV34A0A0B4J273 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV34A0A0B4J273 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRAV34A0A0B4J273 CD72-202ENST00000378430 585 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAV34A0A0B4J273 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAV34A0A0B4J273 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRAV34A0A0B4J273 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV34A0A0B4J273 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV34A0A0B4J273 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV34A0A0B4J273 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
TRAV34A0A0B4J273 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV34A0A0B4J273 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV34A0A0B4J273 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV34A0A0B4J273 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV34A0A0B4J273 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV34A0A0B4J273 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV34A0A0B4J273 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV34A0A0B4J273 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV34A0A0B4J273 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV34A0A0B4J273 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV34A0A0B4J273 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.05■□□□□ 0.16
TRAV34A0A0B4J273 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TRAV34A0A0B4J273 AL033527.3-201ENST00000566366 1196 ntBASIC16.05■□□□□ 0.16
TRAV34A0A0B4J273 AL451085.2-201ENST00000605085 799 ntBASIC16.05■□□□□ 0.16
TRAV34A0A0B4J273 AC092028.1-203ENST00000608262 953 ntBASIC16.05■□□□□ 0.16
TRAV34A0A0B4J273 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV34A0A0B4J273 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.05■□□□□ 0.16
TRAV34A0A0B4J273 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV34A0A0B4J273 GABARAPL3-202ENST00000624044 1851 ntBASIC16.05■□□□□ 0.16
TRAV34A0A0B4J273 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV34A0A0B4J273 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV34A0A0B4J273 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV34A0A0B4J273 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV34A0A0B4J273 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TRAV34A0A0B4J273 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV34A0A0B4J273 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV34A0A0B4J273 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV34A0A0B4J273 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV34A0A0B4J273 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV34A0A0B4J273 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV34A0A0B4J273 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV34A0A0B4J273 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV34A0A0B4J273 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV34A0A0B4J273 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV34A0A0B4J273 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV34A0A0B4J273 AP005212.1-201ENST00000581547 1997 ntBASIC16.04■□□□□ 0.16
TRAV34A0A0B4J273 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV34A0A0B4J273 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV34A0A0B4J273 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV34A0A0B4J273 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV34A0A0B4J273 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV34A0A0B4J273 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV34A0A0B4J273 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV34A0A0B4J273 MTDHP2-201ENST00000601468 714 ntBASIC16.04■□□□□ 0.16
TRAV34A0A0B4J273 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV34A0A0B4J273 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV34A0A0B4J273 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRAV34A0A0B4J273 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms