Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.44■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.44■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.44■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.44■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.44■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 AC008175.2-201ENST00000612840 297 ntBASIC18.44■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.44■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.44■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.44■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.43■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.43■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.43■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.43■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.43■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 SLC7A5P2-201ENST00000553010 536 ntBASIC18.43■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.43■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.43■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.43■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.42■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 POU5F1P4-201ENST00000413175 1085 ntBASIC18.42■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.42■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.42■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 AP001160.3-201ENST00000601484 763 ntBASIC18.42■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 AC121338.2-201ENST00000622535 1744 ntBASIC18.41■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.41■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.41■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.41■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.41■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.41■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 AC006128.1-201ENST00000624704 1661 ntBASIC18.41■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.4■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.4■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.4■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.4■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 RARRES2P11-201ENST00000635158 484 ntBASIC18.4■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.4■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.4■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms