Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV6-7A0A0A0MS04 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
TRBV6-7A0A0A0MS04 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV6-7A0A0A0MS04 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.44■□□□□ 0.38
TRBV6-7A0A0A0MS04 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV6-7A0A0A0MS04 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV6-7A0A0A0MS04 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.44■□□□□ 0.38
TRBV6-7A0A0A0MS04 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.44■□□□□ 0.38
TRBV6-7A0A0A0MS04 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV6-7A0A0A0MS04 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV6-7A0A0A0MS04 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.44■□□□□ 0.38
TRBV6-7A0A0A0MS04 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV6-7A0A0A0MS04 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.44■□□□□ 0.38
TRBV6-7A0A0A0MS04 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV6-7A0A0A0MS04 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TRBV6-7A0A0A0MS04 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.43■□□□□ 0.38
TRBV6-7A0A0A0MS04 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
TRBV6-7A0A0A0MS04 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV6-7A0A0A0MS04 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV6-7A0A0A0MS04 AC073314.1-201ENST00000568729 2216 ntBASIC17.43■□□□□ 0.38
TRBV6-7A0A0A0MS04 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV6-7A0A0A0MS04 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV6-7A0A0A0MS04 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV6-7A0A0A0MS04 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV6-7A0A0A0MS04 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV6-7A0A0A0MS04 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV6-7A0A0A0MS04 MIR4767-201ENST00000582827 78 ntBASIC17.43■□□□□ 0.38
TRBV6-7A0A0A0MS04 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.43■□□□□ 0.38
TRBV6-7A0A0A0MS04 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV6-7A0A0A0MS04 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV6-7A0A0A0MS04 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.43■□□□□ 0.38
TRBV6-7A0A0A0MS04 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.43■□□□□ 0.38
TRBV6-7A0A0A0MS04 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV6-7A0A0A0MS04 AL020996.1-203ENST00000536896 2307 ntBASIC17.43■□□□□ 0.38
TRBV6-7A0A0A0MS04 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV6-7A0A0A0MS04 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV6-7A0A0A0MS04 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV6-7A0A0A0MS04 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV6-7A0A0A0MS04 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.42■□□□□ 0.38
TRBV6-7A0A0A0MS04 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TRBV6-7A0A0A0MS04 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV6-7A0A0A0MS04 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV6-7A0A0A0MS04 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TRBV6-7A0A0A0MS04 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TRBV6-7A0A0A0MS04 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV6-7A0A0A0MS04 AL136116.3-201ENST00000402907 1138 ntBASIC17.42■□□□□ 0.38
TRBV6-7A0A0A0MS04 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.42■□□□□ 0.38
TRBV6-7A0A0A0MS04 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.42■□□□□ 0.38
TRBV6-7A0A0A0MS04 AC233992.3-201ENST00000607491 485 ntBASIC17.42■□□□□ 0.38
TRBV6-7A0A0A0MS04 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV6-7A0A0A0MS04 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV6-7A0A0A0MS04 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
TRBV6-7A0A0A0MS04 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV6-7A0A0A0MS04 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.42■□□□□ 0.38
TRBV6-7A0A0A0MS04 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV6-7A0A0A0MS04 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRBV6-7A0A0A0MS04 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.42■□□□□ 0.38
TRBV6-7A0A0A0MS04 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV6-7A0A0A0MS04 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
TRBV6-7A0A0A0MS04 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV6-7A0A0A0MS04 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.42■□□□□ 0.38
TRBV6-7A0A0A0MS04 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV6-7A0A0A0MS04 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV6-7A0A0A0MS04 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV6-7A0A0A0MS04 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-7A0A0A0MS04 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-7A0A0A0MS04 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-7A0A0A0MS04 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-7A0A0A0MS04 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-7A0A0A0MS04 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-7A0A0A0MS04 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-7A0A0A0MS04 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-7A0A0A0MS04 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV6-7A0A0A0MS04 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-7A0A0A0MS04 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-7A0A0A0MS04 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-7A0A0A0MS04 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-7A0A0A0MS04 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-7A0A0A0MS04 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV6-7A0A0A0MS04 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
TRBV6-7A0A0A0MS04 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-7A0A0A0MS04 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TRBV6-7A0A0A0MS04 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-7A0A0A0MS04 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-7A0A0A0MS04 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-7A0A0A0MS04 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-7A0A0A0MS04 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-7A0A0A0MS04 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-7A0A0A0MS04 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-7A0A0A0MS04 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
TRBV6-7A0A0A0MS04 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TRBV6-7A0A0A0MS04 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV6-7A0A0A0MS04 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.4■□□□□ 0.38
TRBV6-7A0A0A0MS04 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV6-7A0A0A0MS04 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.4■□□□□ 0.38
TRBV6-7A0A0A0MS04 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.4■□□□□ 0.38
TRBV6-7A0A0A0MS04 AC009237.3-201ENST00000393279 1427 ntBASIC17.4■□□□□ 0.38
TRBV6-7A0A0A0MS04 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV6-7A0A0A0MS04 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV6-7A0A0A0MS04 UNC93B3-201ENST00000308076 687 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms