Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AL121748.1-201ENST00000414308 552 ntTSL 3 BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 RPL10P11-201ENST00000414541 616 ntBASIC10.78□□□□□ -0.68
LMO3Q8TAP4 LDAH-206ENST00000419825 826 ntTSL 3 BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 LIAS-204ENST00000424936 1011 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 ZNF816-205ENST00000438970 491 ntTSL 4 BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 TGFA-IT1-201ENST00000441238 436 ntTSL 5 BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 AL109809.2-201ENST00000455216 493 ntBASIC10.78□□□□□ -0.68
LMO3Q8TAP4 RPL3P3-201ENST00000467870 1213 ntBASIC10.78□□□□□ -0.68
LMO3Q8TAP4 LINC01100-201ENST00000471921 740 ntTSL 5 BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 CKLF-CMTM1-201ENST00000527729 585 ntAPPRIS P3 TSL 2 BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 AC009779.5-201ENST00000556606 488 ntTSL 3 BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 AL049870.1-201ENST00000557196 308 ntBASIC10.78□□□□□ -0.68
LMO3Q8TAP4 AC008915.1-201ENST00000561624 837 ntBASIC10.78□□□□□ -0.68
LMO3Q8TAP4 ASIP-202ENST00000568305 610 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 Z94057.1-201ENST00000569593 847 ntTSL 3 BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 ACAP1-209ENST00000575415 317 ntTSL 2 BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 CD226-202ENST00000577287 1009 ntTSL 3 BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 RN7SL663P-201ENST00000578592 299 ntBASIC10.78□□□□□ -0.68
LMO3Q8TAP4 AC015688.5-201ENST00000584605 603 ntAPPRIS P5 TSL 2 BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 RPS27AP16-202ENST00000591758 566 ntBASIC10.78□□□□□ -0.68
LMO3Q8TAP4 AC008742.1-201ENST00000592332 1167 ntBASIC10.78□□□□□ -0.68
LMO3Q8TAP4 AC020904.1-201ENST00000594322 729 ntBASIC10.78□□□□□ -0.68
LMO3Q8TAP4 IK-211ENST00000610522 737 ntTSL 5 BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 EBF3-202ENST00000368648 4375 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 NCALD-212ENST00000519508 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 ZNF185-211ENST00000535861 4421 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 MDC1-201ENST00000376406 7576 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 UBE2D3-208ENST00000394803 2227 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 RHOBTB2-205ENST00000519685 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 TLDC1-201ENST00000343629 5046 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 SLC2A12-201ENST00000275230 4468 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 ZNF585A-203ENST00000392157 3190 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 HAP1-203ENST00000347901 3931 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 RERG-207ENST00000538313 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 TWF1-211ENST00000552521 3012 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 SS18-203ENST00000415083 3414 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 AC108120.3-201ENST00000505953 1510 ntBASIC10.78□□□□□ -0.68
LMO3Q8TAP4 TYRP1-203ENST00000388918 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 ETV6-202ENST00000396373 5989 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 SCN1B-208ENST00000640135 4846 ntTSL 5 BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 UBAP2-205ENST00000379239 2513 ntTSL 2 BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC10.78□□□□□ -0.68
LMO3Q8TAP4 LAMA3-203ENST00000399516 9834 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
LMO3Q8TAP4 ARSF-202ENST00000381127 2164 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LMO3Q8TAP4 AC011467.1-201ENST00000562262 3355 ntTSL 2 BASIC10.77□□□□□ -0.68
LMO3Q8TAP4 PLD2-205ENST00000572940 3391 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
LMO3Q8TAP4 LPIN2-201ENST00000261596 6229 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LMO3Q8TAP4 STXBP1-209ENST00000626539 3840 ntTSL 5 BASIC10.77□□□□□ -0.68
LMO3Q8TAP4 N6AMT1-201ENST00000303775 4865 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LMO3Q8TAP4 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
LMO3Q8TAP4 EIF4BP3-201ENST00000432132 1850 ntBASIC10.77□□□□□ -0.69
LMO3Q8TAP4 ARPC3-201ENST00000228825 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LMO3Q8TAP4 SWT1-201ENST00000367500 3830 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LMO3Q8TAP4 C9orf85-203ENST00000377031 1107 ntTSL 3 BASIC10.77□□□□□ -0.69
LMO3Q8TAP4 RN7SKP120-201ENST00000410761 341 ntBASIC10.77□□□□□ -0.69
LMO3Q8TAP4 AL445070.1-201ENST00000414631 714 ntTSL 3 BASIC10.77□□□□□ -0.69
LMO3Q8TAP4 AL355304.1-201ENST00000417650 554 ntTSL 3 BASIC10.77□□□□□ -0.69
LMO3Q8TAP4 AL451062.1-201ENST00000437753 469 ntTSL 2 BASIC10.77□□□□□ -0.69
LMO3Q8TAP4 LINC00395-201ENST00000444536 406 ntTSL 3 BASIC10.77□□□□□ -0.69
LMO3Q8TAP4 RN7SL380P-201ENST00000461702 308 ntBASIC10.77□□□□□ -0.69
LMO3Q8TAP4 RN7SL334P-201ENST00000465067 279 ntBASIC10.77□□□□□ -0.69
LMO3Q8TAP4 AC079953.1-201ENST00000472008 736 ntBASIC10.77□□□□□ -0.69
LMO3Q8TAP4 THAP6-210ENST00000507557 542 ntTSL 4 BASIC10.77□□□□□ -0.69
LMO3Q8TAP4 AC010307.2-201ENST00000509051 466 ntTSL 4 BASIC10.77□□□□□ -0.69
LMO3Q8TAP4 AC245187.1-201ENST00000520162 559 ntTSL 4 BASIC10.77□□□□□ -0.69
LMO3Q8TAP4 CD3D-204ENST00000529594 422 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LMO3Q8TAP4 LINC01588-209ENST00000556019 534 ntTSL 3 BASIC10.77□□□□□ -0.69
LMO3Q8TAP4 MIR4663-201ENST00000582039 76 ntBASIC10.77□□□□□ -0.69
LMO3Q8TAP4 MIR663AHG-218ENST00000598448 804 ntTSL 5 BASIC10.77□□□□□ -0.69
LMO3Q8TAP4 AC009061.2-204ENST00000602476 524 ntTSL 3 BASIC10.77□□□□□ -0.69
LMO3Q8TAP4 AL357518.1-201ENST00000607169 430 ntBASIC10.77□□□□□ -0.69
LMO3Q8TAP4 AC084824.3-201ENST00000620472 856 ntBASIC10.77□□□□□ -0.69
LMO3Q8TAP4 AC007241.1-201ENST00000634531 933 ntBASIC10.77□□□□□ -0.69
LMO3Q8TAP4 AL158175.1-202ENST00000635173 1194 ntTSL 5 BASIC10.77□□□□□ -0.69
LMO3Q8TAP4 KCNQ3-204ENST00000521134 2577 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
LMO3Q8TAP4 RABGAP1-202ENST00000373647 4997 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LMO3Q8TAP4 NRAP-204ENST00000369360 5535 ntTSL 5 BASIC10.77□□□□□ -0.69
LMO3Q8TAP4 KRT18P59-202ENST00000534728 3338 ntTSL 2 BASIC10.77□□□□□ -0.69
LMO3Q8TAP4 ATP12A-202ENST00000381946 4258 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LMO3Q8TAP4 AF111167.2-201ENST00000560419 4059 ntBASIC10.77□□□□□ -0.69
LMO3Q8TAP4 DOCK8-201ENST00000382329 6124 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LMO3Q8TAP4 CECR2-201ENST00000262608 4783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LMO3Q8TAP4 NPSR1-204ENST00000381542 1369 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LMO3Q8TAP4 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LMO3Q8TAP4 CYTH4-201ENST00000248901 3206 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LMO3Q8TAP4 DPH6-201ENST00000256538 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LMO3Q8TAP4 ACSL6-212ENST00000431707 2060 ntTSL 5 BASIC10.77□□□□□ -0.69
LMO3Q8TAP4 GAREM1-202ENST00000399218 7033 ntAPPRIS P3 TSL 2 BASIC10.76□□□□□ -0.69
LMO3Q8TAP4 GPR37L1-201ENST00000367282 6588 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LMO3Q8TAP4 AP002358.2-201ENST00000532980 2148 ntBASIC10.76□□□□□ -0.69
LMO3Q8TAP4 SALL1-202ENST00000440970 5253 ntTSL 5 BASIC10.76□□□□□ -0.69
LMO3Q8TAP4 PFKFB1-202ENST00000375006 1929 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LMO3Q8TAP4 CXorf36-202ENST00000398000 4655 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
LMO3Q8TAP4 MRS2-204ENST00000443868 3980 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
LMO3Q8TAP4 CBWD1-204ENST00000377447 2513 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LMO3Q8TAP4 ITGB6-203ENST00000409872 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LMO3Q8TAP4 ITGBL1-201ENST00000376162 2007 ntTSL 2 BASIC10.76□□□□□ -0.69
LMO3Q8TAP4 AC087203.3-201ENST00000602981 1547 ntBASIC10.76□□□□□ -0.69
LMO3Q8TAP4 KRTAP8-3P-201ENST00000423658 188 ntBASIC10.76□□□□□ -0.69
LMO3Q8TAP4 AL353150.1-202ENST00000429700 585 ntTSL 3 BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 146.6 ms