Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AP006248.5-201ENST00000624786 421 ntBASIC9.41□□□□□ -0.9
NPIPA3F8WFD2 KIAA0825-201ENST00000329378 2262 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
NPIPA3F8WFD2 CYP24A1-201ENST00000216862 3262 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
NPIPA3F8WFD2 NUP98-205ENST00000397007 3698 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
NPIPA3F8WFD2 HIP1-204ENST00000434438 7066 ntTSL 2 BASIC9.41□□□□□ -0.9
NPIPA3F8WFD2 RNF43-207ENST00000583753 3560 ntTSL 2 BASIC9.41□□□□□ -0.9
NPIPA3F8WFD2 ATP1A2-201ENST00000361216 5421 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
NPIPA3F8WFD2 WDR76-202ENST00000381246 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
NPIPA3F8WFD2 CLNS1A-204ENST00000525428 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
NPIPA3F8WFD2 VLDLR-203ENST00000382100 9163 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
NPIPA3F8WFD2 ENO4-201ENST00000341276 2865 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
NPIPA3F8WFD2 ITIH4-202ENST00000406595 2872 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
NPIPA3F8WFD2 AP3B2-201ENST00000261722 3736 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
NPIPA3F8WFD2 SCML1-202ENST00000380043 2830 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
NPIPA3F8WFD2 SLAMF7-205ENST00000444090 2393 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
NPIPA3F8WFD2 SLC14A1-205ENST00000502059 2371 ntTSL 2 BASIC9.41□□□□□ -0.9
NPIPA3F8WFD2 DNHD1-202ENST00000354685 3205 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
NPIPA3F8WFD2 MMP27-201ENST00000260229 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
NPIPA3F8WFD2 WSB1-209ENST00000581185 1900 ntTSL 2 BASIC9.41□□□□□ -0.9
NPIPA3F8WFD2 C14orf159-229ENST00000523816 2764 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
NPIPA3F8WFD2 ZNF321P-201ENST00000313956 2341 ntTSL 2 BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 CSRP3-202ENST00000533783 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 ZNF469-201ENST00000437464 13203 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 FAM41C-203ENST00000446136 1807 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 KIAA1324-203ENST00000369939 3442 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 KIF18B-202ENST00000587309 4217 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 ADGRF3-203ENST00000421160 3353 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 ZNF550-206ENST00000506609 1361 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 TMEM105-201ENST00000332900 3321 ntAPPRIS P2 TSL 2 BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 ODF2-219ENST00000546203 2140 ntTSL 2 BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 AC008040.1-204ENST00000469301 1738 ntTSL 2 BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 ALOXE3-203ENST00000448843 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 AK2-202ENST00000373449 3586 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 ALDH1L1-201ENST00000273450 3179 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 ZNF691-205ENST00000372507 1683 ntAPPRIS P3 TSL 3 BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 STX16-204ENST00000359617 4273 ntTSL 5 BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 CCL21-201ENST00000259607 852 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 IQCF2-201ENST00000333127 578 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 FKBP1A-202ENST00000381719 747 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 MIR197-201ENST00000384976 75 ntBASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 RN7SKP228-201ENST00000411042 263 ntBASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 RN7SKP172-201ENST00000411341 298 ntBASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 NDUFB4P3-201ENST00000418418 390 ntBASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 STK33P1-201ENST00000423835 1218 ntBASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 AC118555.1-201ENST00000426386 696 ntTSL 3 BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 AL157702.2-201ENST00000428292 1223 ntTSL 3 BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 MIR646HG-206ENST00000431181 858 ntTSL 3 BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 AC009502.2-201ENST00000452903 766 ntBASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 AC079953.1-201ENST00000472008 736 ntBASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 RPL29P12-201ENST00000481681 467 ntBASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 LINC01843-201ENST00000515627 1107 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 CRYAB-211ENST00000531198 1013 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 PRSS2-201ENST00000539842 795 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 AP003721.3-201ENST00000543275 405 ntTSL 2 BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 AC018653.1-202ENST00000545794 490 ntTSL 3 BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 FAHD2P1-201ENST00000546381 939 ntBASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 RPS26-203ENST00000552361 623 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 WBP1LP5-201ENST00000560907 414 ntBASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 AC092119.1-201ENST00000562640 934 ntBASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 GDPD1-206ENST00000581276 1055 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 RN7SL96P-201ENST00000582641 283 ntBASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 AC104564.6-201ENST00000582881 1052 ntBASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 ZNF20-208ENST00000600335 560 ntTSL 4 BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 AC010904.2-201ENST00000606959 634 ntBASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 AC244517.2-201ENST00000607216 587 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 ABCC8-220ENST00000612903 183 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 HOXB13-AS1_2.1-201ENST00000612962 81 ntBASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 BX640514.2-201ENST00000617730 625 ntTSL 3 BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 CBR3-AS1-211ENST00000623579 651 ntTSL 5 BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 CBR3-AS1-212ENST00000623638 885 ntTSL 5 BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 CBR3-AS1-214ENST00000624080 822 ntTSL 5 BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 CBR3-AS1-217ENST00000625079 743 ntTSL 5 BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 CBR3-AS1-218ENST00000625189 517 ntTSL 5 BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 AC005154.1-207ENST00000625565 597 ntTSL 5 BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 TTC38-207ENST00000629918 162 ntTSL 5 BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 AL137798.3-201ENST00000639399 166 ntBASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 DERA-204ENST00000526530 1619 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 DNTT-201ENST00000371174 1972 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 DCAF13-208ENST00000612750 1967 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 HADHA-201ENST00000380649 3037 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 ASPA-201ENST00000263080 5431 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 SEM1-205ENST00000444799 1590 ntTSL 2 BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 AC079416.1-201ENST00000566796 1569 ntBASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 SCMH1-207ENST00000372597 3252 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
NPIPA3F8WFD2 TNS1-209ENST00000446688 4292 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
NPIPA3F8WFD2 ADD3-AS1-202ENST00000369657 1882 ntTSL 5 BASIC9.4□□□□□ -0.91
NPIPA3F8WFD2 LINC01539-205ENST00000591974 1884 ntTSL 2 BASIC9.4□□□□□ -0.91
NPIPA3F8WFD2 OPTN-206ENST00000378764 2498 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.91
NPIPA3F8WFD2 CLIP4-204ENST00000404424 2480 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
NPIPA3F8WFD2 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
NPIPA3F8WFD2 EXOC7-221ENST00000634349 2124 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
NPIPA3F8WFD2 AC034229.3-201ENST00000606203 2436 ntBASIC9.4□□□□□ -0.91
NPIPA3F8WFD2 CACNB4-204ENST00000427385 1776 ntTSL 5 BASIC9.4□□□□□ -0.91
NPIPA3F8WFD2 OXCT1-201ENST00000196371 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
NPIPA3F8WFD2 ZNF589-201ENST00000354698 3368 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
NPIPA3F8WFD2 C17orf80-204ENST00000426147 2075 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.91
NPIPA3F8WFD2 INPP5B-206ENST00000458109 3979 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 MYO1H-202ENST00000431443 4258 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 GIMAP6-203ENST00000618759 3910 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 RPL32-203ENST00000396957 1749 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 1329.7 ms