Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PTCH2Q9Y6C5 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTCH2Q9Y6C5 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC23.81■■□□□ 1.4
PTCH2Q9Y6C5 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PTCH2Q9Y6C5 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.81■■□□□ 1.4
PTCH2Q9Y6C5 KRT18P35-201ENST00000510488 1269 ntBASIC23.81■■□□□ 1.4
PTCH2Q9Y6C5 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.81■■□□□ 1.4
PTCH2Q9Y6C5 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC23.81■■□□□ 1.4
PTCH2Q9Y6C5 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTCH2Q9Y6C5 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC23.81■■□□□ 1.4
PTCH2Q9Y6C5 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PTCH2Q9Y6C5 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTCH2Q9Y6C5 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC23.8■■□□□ 1.4
PTCH2Q9Y6C5 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC23.8■■□□□ 1.4
PTCH2Q9Y6C5 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.8■■□□□ 1.4
PTCH2Q9Y6C5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.8■■□□□ 1.4
PTCH2Q9Y6C5 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTCH2Q9Y6C5 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.79■■□□□ 1.4
PTCH2Q9Y6C5 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTCH2Q9Y6C5 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTCH2Q9Y6C5 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTCH2Q9Y6C5 MCRIP2P1-201ENST00000394346 511 ntBASIC23.79■■□□□ 1.4
PTCH2Q9Y6C5 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTCH2Q9Y6C5 MIR4785-201ENST00000585005 73 ntBASIC23.79■■□□□ 1.4
PTCH2Q9Y6C5 KLF2-202ENST00000592003 564 ntTSL 3 BASIC23.79■■□□□ 1.4
PTCH2Q9Y6C5 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTCH2Q9Y6C5 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTCH2Q9Y6C5 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTCH2Q9Y6C5 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTCH2Q9Y6C5 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTCH2Q9Y6C5 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTCH2Q9Y6C5 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
PTCH2Q9Y6C5 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.79■■□□□ 1.4
PTCH2Q9Y6C5 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTCH2Q9Y6C5 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.78■■□□□ 1.4
PTCH2Q9Y6C5 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.78■■□□□ 1.4
PTCH2Q9Y6C5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.78■■□□□ 1.4
PTCH2Q9Y6C5 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTCH2Q9Y6C5 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PTCH2Q9Y6C5 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
PTCH2Q9Y6C5 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTCH2Q9Y6C5 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
PTCH2Q9Y6C5 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.78■■□□□ 1.4
PTCH2Q9Y6C5 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.78■■□□□ 1.4
PTCH2Q9Y6C5 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTCH2Q9Y6C5 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTCH2Q9Y6C5 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTCH2Q9Y6C5 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTCH2Q9Y6C5 TMPOP1-202ENST00000424642 1267 ntBASIC23.77■■□□□ 1.4
PTCH2Q9Y6C5 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC23.77■■□□□ 1.4
PTCH2Q9Y6C5 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC23.77■■□□□ 1.4
PTCH2Q9Y6C5 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PTCH2Q9Y6C5 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PTCH2Q9Y6C5 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTCH2Q9Y6C5 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTCH2Q9Y6C5 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC23.76■■□□□ 1.39
PTCH2Q9Y6C5 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC23.76■■□□□ 1.39
PTCH2Q9Y6C5 CDV3P1-201ENST00000471403 739 ntBASIC23.76■■□□□ 1.39
PTCH2Q9Y6C5 NT5C-211ENST00000582170 653 ntTSL 3 BASIC23.76■■□□□ 1.39
PTCH2Q9Y6C5 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PTCH2Q9Y6C5 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PTCH2Q9Y6C5 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTCH2Q9Y6C5 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.76■■□□□ 1.39
PTCH2Q9Y6C5 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
PTCH2Q9Y6C5 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC23.76■■□□□ 1.39
PTCH2Q9Y6C5 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
PTCH2Q9Y6C5 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PTCH2Q9Y6C5 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PTCH2Q9Y6C5 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PTCH2Q9Y6C5 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PTCH2Q9Y6C5 ARMC10P1-201ENST00000313754 855 ntBASIC23.75■■□□□ 1.39
PTCH2Q9Y6C5 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PTCH2Q9Y6C5 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PTCH2Q9Y6C5 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PTCH2Q9Y6C5 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PTCH2Q9Y6C5 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC23.75■■□□□ 1.39
PTCH2Q9Y6C5 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC23.75■■□□□ 1.39
PTCH2Q9Y6C5 AL355075.4-201ENST00000554988 638 ntBASIC23.75■■□□□ 1.39
PTCH2Q9Y6C5 RN7SL850P-201ENST00000579959 291 ntBASIC23.75■■□□□ 1.39
PTCH2Q9Y6C5 AP001412.1-201ENST00000608405 714 ntBASIC23.75■■□□□ 1.39
PTCH2Q9Y6C5 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
PTCH2Q9Y6C5 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PTCH2Q9Y6C5 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PTCH2Q9Y6C5 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTCH2Q9Y6C5 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTCH2Q9Y6C5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
PTCH2Q9Y6C5 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PTCH2Q9Y6C5 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
PTCH2Q9Y6C5 KRT18P68-201ENST00000392293 1000 ntBASIC23.74■■□□□ 1.39
PTCH2Q9Y6C5 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTCH2Q9Y6C5 SERF2-207ENST00000409614 582 ntTSL 2 BASIC23.74■■□□□ 1.39
PTCH2Q9Y6C5 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PTCH2Q9Y6C5 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
PTCH2Q9Y6C5 LY6E-205ENST00000519611 635 ntTSL 3 BASIC23.74■■□□□ 1.39
PTCH2Q9Y6C5 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
PTCH2Q9Y6C5 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PTCH2Q9Y6C5 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC23.74■■□□□ 1.39
PTCH2Q9Y6C5 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC23.74■■□□□ 1.39
PTCH2Q9Y6C5 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC23.74■■□□□ 1.39
PTCH2Q9Y6C5 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms