Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CYP46A1Q9Y6A2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC24.77■■□□□ 1.56
CYP46A1Q9Y6A2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.77■■□□□ 1.56
CYP46A1Q9Y6A2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
CYP46A1Q9Y6A2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CYP46A1Q9Y6A2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.77■■□□□ 1.56
CYP46A1Q9Y6A2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CYP46A1Q9Y6A2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC24.77■■□□□ 1.56
CYP46A1Q9Y6A2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.56
CYP46A1Q9Y6A2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC24.76■■□□□ 1.55
CYP46A1Q9Y6A2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CYP46A1Q9Y6A2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC24.76■■□□□ 1.55
CYP46A1Q9Y6A2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC24.76■■□□□ 1.55
CYP46A1Q9Y6A2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CYP46A1Q9Y6A2 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.76■■□□□ 1.55
CYP46A1Q9Y6A2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CYP46A1Q9Y6A2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CYP46A1Q9Y6A2 PLK5-205ENST00000642079 1969 ntBASIC24.76■■□□□ 1.55
CYP46A1Q9Y6A2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
CYP46A1Q9Y6A2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC24.76■■□□□ 1.55
CYP46A1Q9Y6A2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CYP46A1Q9Y6A2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CYP46A1Q9Y6A2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
CYP46A1Q9Y6A2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CYP46A1Q9Y6A2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CYP46A1Q9Y6A2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC24.75■■□□□ 1.55
CYP46A1Q9Y6A2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CYP46A1Q9Y6A2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CYP46A1Q9Y6A2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CYP46A1Q9Y6A2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CYP46A1Q9Y6A2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CYP46A1Q9Y6A2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CYP46A1Q9Y6A2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
CYP46A1Q9Y6A2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC24.75■■□□□ 1.55
CYP46A1Q9Y6A2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CYP46A1Q9Y6A2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.75■■□□□ 1.55
CYP46A1Q9Y6A2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.75■■□□□ 1.55
CYP46A1Q9Y6A2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC24.75■■□□□ 1.55
CYP46A1Q9Y6A2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CYP46A1Q9Y6A2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CYP46A1Q9Y6A2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC24.75■■□□□ 1.55
CYP46A1Q9Y6A2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
CYP46A1Q9Y6A2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CYP46A1Q9Y6A2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CYP46A1Q9Y6A2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.74■■□□□ 1.55
CYP46A1Q9Y6A2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CYP46A1Q9Y6A2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC24.74■■□□□ 1.55
CYP46A1Q9Y6A2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC24.74■■□□□ 1.55
CYP46A1Q9Y6A2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CYP46A1Q9Y6A2 LINC02228-203ENST00000641970 1355 ntBASIC24.74■■□□□ 1.55
CYP46A1Q9Y6A2 AP004607.4-201ENST00000530158 1459 ntBASIC24.74■■□□□ 1.55
CYP46A1Q9Y6A2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
CYP46A1Q9Y6A2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CYP46A1Q9Y6A2 AC006128.1-201ENST00000624704 1661 ntBASIC24.74■■□□□ 1.55
CYP46A1Q9Y6A2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CYP46A1Q9Y6A2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
CYP46A1Q9Y6A2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
CYP46A1Q9Y6A2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC24.74■■□□□ 1.55
CYP46A1Q9Y6A2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
CYP46A1Q9Y6A2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC24.73■■□□□ 1.55
CYP46A1Q9Y6A2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CYP46A1Q9Y6A2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CYP46A1Q9Y6A2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CYP46A1Q9Y6A2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CYP46A1Q9Y6A2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC24.73■■□□□ 1.55
CYP46A1Q9Y6A2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CYP46A1Q9Y6A2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC24.73■■□□□ 1.55
CYP46A1Q9Y6A2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CYP46A1Q9Y6A2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CYP46A1Q9Y6A2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CYP46A1Q9Y6A2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC24.73■■□□□ 1.55
CYP46A1Q9Y6A2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CYP46A1Q9Y6A2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
CYP46A1Q9Y6A2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CYP46A1Q9Y6A2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CYP46A1Q9Y6A2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
CYP46A1Q9Y6A2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC24.72■■□□□ 1.55
CYP46A1Q9Y6A2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CYP46A1Q9Y6A2 AL157384.1-201ENST00000445995 2473 ntBASIC24.72■■□□□ 1.55
CYP46A1Q9Y6A2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CYP46A1Q9Y6A2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CYP46A1Q9Y6A2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CYP46A1Q9Y6A2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC24.72■■□□□ 1.55
CYP46A1Q9Y6A2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC24.72■■□□□ 1.55
CYP46A1Q9Y6A2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC24.72■■□□□ 1.55
CYP46A1Q9Y6A2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC24.72■■□□□ 1.55
CYP46A1Q9Y6A2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CYP46A1Q9Y6A2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CYP46A1Q9Y6A2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CYP46A1Q9Y6A2 AC121338.2-201ENST00000622535 1744 ntBASIC24.72■■□□□ 1.55
CYP46A1Q9Y6A2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CYP46A1Q9Y6A2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
CYP46A1Q9Y6A2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CYP46A1Q9Y6A2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
CYP46A1Q9Y6A2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
CYP46A1Q9Y6A2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CYP46A1Q9Y6A2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
CYP46A1Q9Y6A2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC24.71■■□□□ 1.55
CYP46A1Q9Y6A2 AC008175.2-201ENST00000612840 297 ntBASIC24.71■■□□□ 1.55
CYP46A1Q9Y6A2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms