Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF11Q9Y3C5 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF11Q9Y3C5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF11Q9Y3C5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF11Q9Y3C5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RNF11Q9Y3C5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF11Q9Y3C5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF11Q9Y3C5 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF11Q9Y3C5 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
RNF11Q9Y3C5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF11Q9Y3C5 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF11Q9Y3C5 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF11Q9Y3C5 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
RNF11Q9Y3C5 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF11Q9Y3C5 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF11Q9Y3C5 AC007952.6-201ENST00000573168 2673 ntBASIC20.34■□□□□ 0.85
RNF11Q9Y3C5 AC003957.1-201ENST00000625108 2673 ntBASIC20.34■□□□□ 0.85
RNF11Q9Y3C5 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF11Q9Y3C5 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF11Q9Y3C5 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.34■□□□□ 0.85
RNF11Q9Y3C5 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF11Q9Y3C5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF11Q9Y3C5 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF11Q9Y3C5 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF11Q9Y3C5 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF11Q9Y3C5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF11Q9Y3C5 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF11Q9Y3C5 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF11Q9Y3C5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF11Q9Y3C5 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF11Q9Y3C5 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
RNF11Q9Y3C5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF11Q9Y3C5 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF11Q9Y3C5 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF11Q9Y3C5 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF11Q9Y3C5 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF11Q9Y3C5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.33■□□□□ 0.85
RNF11Q9Y3C5 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF11Q9Y3C5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF11Q9Y3C5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF11Q9Y3C5 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
RNF11Q9Y3C5 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.33■□□□□ 0.85
RNF11Q9Y3C5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.33■□□□□ 0.85
RNF11Q9Y3C5 AL354811.1-201ENST00000610286 706 ntBASIC20.33■□□□□ 0.85
RNF11Q9Y3C5 MIR6084-201ENST00000622012 110 ntBASIC20.33■□□□□ 0.85
RNF11Q9Y3C5 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
RNF11Q9Y3C5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF11Q9Y3C5 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF11Q9Y3C5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
RNF11Q9Y3C5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
RNF11Q9Y3C5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF11Q9Y3C5 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RNF11Q9Y3C5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF11Q9Y3C5 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RNF11Q9Y3C5 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF11Q9Y3C5 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF11Q9Y3C5 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF11Q9Y3C5 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RNF11Q9Y3C5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF11Q9Y3C5 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF11Q9Y3C5 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF11Q9Y3C5 TPRG1LP1-201ENST00000598702 760 ntBASIC20.32■□□□□ 0.84
RNF11Q9Y3C5 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.32■□□□□ 0.84
RNF11Q9Y3C5 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF11Q9Y3C5 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF11Q9Y3C5 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF11Q9Y3C5 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF11Q9Y3C5 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF11Q9Y3C5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF11Q9Y3C5 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF11Q9Y3C5 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF11Q9Y3C5 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF11Q9Y3C5 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF11Q9Y3C5 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF11Q9Y3C5 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.31■□□□□ 0.84
RNF11Q9Y3C5 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF11Q9Y3C5 AC105265.2-201ENST00000467189 838 ntBASIC20.31■□□□□ 0.84
RNF11Q9Y3C5 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.31■□□□□ 0.84
RNF11Q9Y3C5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.31■□□□□ 0.84
RNF11Q9Y3C5 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF11Q9Y3C5 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RNF11Q9Y3C5 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RNF11Q9Y3C5 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF11Q9Y3C5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RNF11Q9Y3C5 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF11Q9Y3C5 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF11Q9Y3C5 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RNF11Q9Y3C5 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF11Q9Y3C5 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF11Q9Y3C5 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF11Q9Y3C5 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF11Q9Y3C5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.3■□□□□ 0.84
RNF11Q9Y3C5 AL358852.1-201ENST00000623174 1268 ntBASIC20.3■□□□□ 0.84
RNF11Q9Y3C5 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF11Q9Y3C5 AL391422.3-201ENST00000603791 2761 ntBASIC20.3■□□□□ 0.84
RNF11Q9Y3C5 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF11Q9Y3C5 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF11Q9Y3C5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF11Q9Y3C5 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF11Q9Y3C5 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms