Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FNDC3AQ9Y2H6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FNDC3AQ9Y2H6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FNDC3AQ9Y2H6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.3■■□□□ 1
FNDC3AQ9Y2H6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FNDC3AQ9Y2H6 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FNDC3AQ9Y2H6 TSPY6P-201ENST00000448518 926 ntBASIC21.3■■□□□ 1
FNDC3AQ9Y2H6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.3■■□□□ 1
FNDC3AQ9Y2H6 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.3■■□□□ 1
FNDC3AQ9Y2H6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.3■■□□□ 1
FNDC3AQ9Y2H6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.3■■□□□ 1
FNDC3AQ9Y2H6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FNDC3AQ9Y2H6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FNDC3AQ9Y2H6 AC003102.1-202ENST00000563394 1796 ntBASIC21.29■■□□□ 1
FNDC3AQ9Y2H6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
FNDC3AQ9Y2H6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.29■■□□□ 1
FNDC3AQ9Y2H6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
FNDC3AQ9Y2H6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.29■■□□□ 1
FNDC3AQ9Y2H6 DUX4L16-201ENST00000555130 1264 ntBASIC21.29■■□□□ 1
FNDC3AQ9Y2H6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.29■■□□□ 1
FNDC3AQ9Y2H6 UBE2DNL-204ENST00000602536 740 ntBASIC21.29■■□□□ 1
FNDC3AQ9Y2H6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.29■■□□□ 1
FNDC3AQ9Y2H6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.29■■□□□ 1
FNDC3AQ9Y2H6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FNDC3AQ9Y2H6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
FNDC3AQ9Y2H6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.29■■□□□ 1
FNDC3AQ9Y2H6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.29■■□□□ 1
FNDC3AQ9Y2H6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.29■■□□□ 1
FNDC3AQ9Y2H6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.29■■□□□ 1
FNDC3AQ9Y2H6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
FNDC3AQ9Y2H6 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FNDC3AQ9Y2H6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.28■■□□□ 1
FNDC3AQ9Y2H6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
FNDC3AQ9Y2H6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FNDC3AQ9Y2H6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.28■■□□□ 1
FNDC3AQ9Y2H6 GUSBP6-202ENST00000438529 1198 ntBASIC21.28■■□□□ 1
FNDC3AQ9Y2H6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.28■■□□□ 1
FNDC3AQ9Y2H6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FNDC3AQ9Y2H6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.28■■□□□ 1
FNDC3AQ9Y2H6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.28■■□□□ 1
FNDC3AQ9Y2H6 AC005181.1-201ENST00000604782 1256 ntBASIC21.28■■□□□ 1
FNDC3AQ9Y2H6 AC231657.2-201ENST00000624556 255 ntBASIC21.28■■□□□ 1
FNDC3AQ9Y2H6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
FNDC3AQ9Y2H6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FNDC3AQ9Y2H6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.28■■□□□ 1
FNDC3AQ9Y2H6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.27■■□□□ 1
FNDC3AQ9Y2H6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
FNDC3AQ9Y2H6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
FNDC3AQ9Y2H6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
FNDC3AQ9Y2H6 AC055733.4-201ENST00000638462 1354 ntBASIC21.27■■□□□ 1
FNDC3AQ9Y2H6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FNDC3AQ9Y2H6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.27■■□□□ 1
FNDC3AQ9Y2H6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.27■■□□□ 1
FNDC3AQ9Y2H6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
FNDC3AQ9Y2H6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
FNDC3AQ9Y2H6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.27■■□□□ 1
FNDC3AQ9Y2H6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.27■■□□□ 1
FNDC3AQ9Y2H6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.27■■□□□ 1
FNDC3AQ9Y2H6 SLC7A5P2-201ENST00000553010 536 ntBASIC21.27■■□□□ 1
FNDC3AQ9Y2H6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.27■■□□□ 1
FNDC3AQ9Y2H6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
FNDC3AQ9Y2H6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
FNDC3AQ9Y2H6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
FNDC3AQ9Y2H6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
FNDC3AQ9Y2H6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FNDC3AQ9Y2H6 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
FNDC3AQ9Y2H6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
FNDC3AQ9Y2H6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.27■□□□□ 0.99
FNDC3AQ9Y2H6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
FNDC3AQ9Y2H6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FNDC3AQ9Y2H6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FNDC3AQ9Y2H6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FNDC3AQ9Y2H6 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
FNDC3AQ9Y2H6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FNDC3AQ9Y2H6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FNDC3AQ9Y2H6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.26■□□□□ 0.99
FNDC3AQ9Y2H6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
FNDC3AQ9Y2H6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
FNDC3AQ9Y2H6 AC007322.1-201ENST00000426983 750 ntBASIC21.26■□□□□ 0.99
FNDC3AQ9Y2H6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FNDC3AQ9Y2H6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
FNDC3AQ9Y2H6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.26■□□□□ 0.99
FNDC3AQ9Y2H6 AL138781.1-201ENST00000566567 1274 ntBASIC21.26■□□□□ 0.99
FNDC3AQ9Y2H6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
FNDC3AQ9Y2H6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
FNDC3AQ9Y2H6 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FNDC3AQ9Y2H6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
FNDC3AQ9Y2H6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
FNDC3AQ9Y2H6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.26■□□□□ 0.99
FNDC3AQ9Y2H6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.25■□□□□ 0.99
FNDC3AQ9Y2H6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
FNDC3AQ9Y2H6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.25■□□□□ 0.99
FNDC3AQ9Y2H6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FNDC3AQ9Y2H6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
FNDC3AQ9Y2H6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FNDC3AQ9Y2H6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FNDC3AQ9Y2H6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
FNDC3AQ9Y2H6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.25■□□□□ 0.99
FNDC3AQ9Y2H6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.25■□□□□ 0.99
FNDC3AQ9Y2H6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms