Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 DUX4L2-201ENST00000561772 1275 ntBASIC21.27■■□□□ 1
UBP1Q9NZI7 AC087623.3-201ENST00000607047 1098 ntBASIC21.27■■□□□ 1
UBP1Q9NZI7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.27■■□□□ 1
UBP1Q9NZI7 DUX4L6-201ENST00000626483 1275 ntBASIC21.27■■□□□ 1
UBP1Q9NZI7 DUX4L1-201ENST00000627662 1275 ntBASIC21.27■■□□□ 1
UBP1Q9NZI7 DUX4L8-201ENST00000629013 1275 ntBASIC21.27■■□□□ 1
UBP1Q9NZI7 DUX4L3-201ENST00000630187 1275 ntBASIC21.27■■□□□ 1
UBP1Q9NZI7 DUX4L7-201ENST00000630678 1275 ntBASIC21.27■■□□□ 1
UBP1Q9NZI7 DUX4L5-201ENST00000630834 1275 ntBASIC21.27■■□□□ 1
UBP1Q9NZI7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.27■■□□□ 1
UBP1Q9NZI7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
UBP1Q9NZI7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.27■□□□□ 0.99
UBP1Q9NZI7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBP1Q9NZI7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBP1Q9NZI7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBP1Q9NZI7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
UBP1Q9NZI7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.26■□□□□ 0.99
UBP1Q9NZI7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.26■□□□□ 0.99
UBP1Q9NZI7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.26■□□□□ 0.99
UBP1Q9NZI7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.26■□□□□ 0.99
UBP1Q9NZI7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.26■□□□□ 0.99
UBP1Q9NZI7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBP1Q9NZI7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.26■□□□□ 0.99
UBP1Q9NZI7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBP1Q9NZI7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.26■□□□□ 0.99
UBP1Q9NZI7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBP1Q9NZI7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBP1Q9NZI7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBP1Q9NZI7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBP1Q9NZI7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
UBP1Q9NZI7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBP1Q9NZI7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBP1Q9NZI7 AC097381.1-201ENST00000429019 1296 ntBASIC21.25■□□□□ 0.99
UBP1Q9NZI7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.25■□□□□ 0.99
UBP1Q9NZI7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.25■□□□□ 0.99
UBP1Q9NZI7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.25■□□□□ 0.99
UBP1Q9NZI7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.25■□□□□ 0.99
UBP1Q9NZI7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBP1Q9NZI7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
UBP1Q9NZI7 AP004607.4-201ENST00000530158 1459 ntBASIC21.25■□□□□ 0.99
UBP1Q9NZI7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
UBP1Q9NZI7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.25■□□□□ 0.99
UBP1Q9NZI7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.24■□□□□ 0.99
UBP1Q9NZI7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBP1Q9NZI7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBP1Q9NZI7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
UBP1Q9NZI7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBP1Q9NZI7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBP1Q9NZI7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBP1Q9NZI7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBP1Q9NZI7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.24■□□□□ 0.99
UBP1Q9NZI7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.24■□□□□ 0.99
UBP1Q9NZI7 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.24■□□□□ 0.99
UBP1Q9NZI7 KRT18P61-201ENST00000585825 1298 ntBASIC21.24■□□□□ 0.99
UBP1Q9NZI7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.24■□□□□ 0.99
UBP1Q9NZI7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.24■□□□□ 0.99
UBP1Q9NZI7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
UBP1Q9NZI7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBP1Q9NZI7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBP1Q9NZI7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.24■□□□□ 0.99
UBP1Q9NZI7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBP1Q9NZI7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
UBP1Q9NZI7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
UBP1Q9NZI7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBP1Q9NZI7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UBP1Q9NZI7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBP1Q9NZI7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.23■□□□□ 0.99
UBP1Q9NZI7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.23■□□□□ 0.99
UBP1Q9NZI7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
UBP1Q9NZI7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
UBP1Q9NZI7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.23■□□□□ 0.99
UBP1Q9NZI7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.23■□□□□ 0.99
UBP1Q9NZI7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.23■□□□□ 0.99
UBP1Q9NZI7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.23■□□□□ 0.99
UBP1Q9NZI7 AC138907.5-202ENST00000569484 235 ntBASIC21.23■□□□□ 0.99
UBP1Q9NZI7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.23■□□□□ 0.99
UBP1Q9NZI7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.23■□□□□ 0.99
UBP1Q9NZI7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBP1Q9NZI7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UBP1Q9NZI7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.23■□□□□ 0.99
UBP1Q9NZI7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UBP1Q9NZI7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBP1Q9NZI7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBP1Q9NZI7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
UBP1Q9NZI7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBP1Q9NZI7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBP1Q9NZI7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
UBP1Q9NZI7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBP1Q9NZI7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
UBP1Q9NZI7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBP1Q9NZI7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
UBP1Q9NZI7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBP1Q9NZI7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.22■□□□□ 0.99
UBP1Q9NZI7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBP1Q9NZI7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
UBP1Q9NZI7 MIR6821-201ENST00000617625 74 ntBASIC21.22■□□□□ 0.99
UBP1Q9NZI7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.22■□□□□ 0.99
UBP1Q9NZI7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
UBP1Q9NZI7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.22■□□□□ 0.99
UBP1Q9NZI7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms