Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPHK1Q9NYA1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SPHK1Q9NYA1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.19■□□□□ 0.82
SPHK1Q9NYA1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.19■□□□□ 0.82
SPHK1Q9NYA1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.19■□□□□ 0.82
SPHK1Q9NYA1 TERF1P5-201ENST00000477545 1207 ntBASIC20.19■□□□□ 0.82
SPHK1Q9NYA1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.19■□□□□ 0.82
SPHK1Q9NYA1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.19■□□□□ 0.82
SPHK1Q9NYA1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPHK1Q9NYA1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPHK1Q9NYA1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPHK1Q9NYA1 Z98882.1-201ENST00000622160 2253 ntBASIC20.19■□□□□ 0.82
SPHK1Q9NYA1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPHK1Q9NYA1 RBM17P2-201ENST00000616397 1405 ntBASIC20.19■□□□□ 0.82
SPHK1Q9NYA1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPHK1Q9NYA1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPHK1Q9NYA1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
SPHK1Q9NYA1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPHK1Q9NYA1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPHK1Q9NYA1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.18■□□□□ 0.82
SPHK1Q9NYA1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.18■□□□□ 0.82
SPHK1Q9NYA1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPHK1Q9NYA1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SPHK1Q9NYA1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.18■□□□□ 0.82
SPHK1Q9NYA1 CROCCP5-201ENST00000436658 830 ntBASIC20.18■□□□□ 0.82
SPHK1Q9NYA1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.18■□□□□ 0.82
SPHK1Q9NYA1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.18■□□□□ 0.82
SPHK1Q9NYA1 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.18■□□□□ 0.82
SPHK1Q9NYA1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPHK1Q9NYA1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.18■□□□□ 0.82
SPHK1Q9NYA1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPHK1Q9NYA1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SPHK1Q9NYA1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.17■□□□□ 0.82
SPHK1Q9NYA1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPHK1Q9NYA1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.17■□□□□ 0.82
SPHK1Q9NYA1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
SPHK1Q9NYA1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.17■□□□□ 0.82
SPHK1Q9NYA1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPHK1Q9NYA1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.17■□□□□ 0.82
SPHK1Q9NYA1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPHK1Q9NYA1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SPHK1Q9NYA1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPHK1Q9NYA1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPHK1Q9NYA1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPHK1Q9NYA1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPHK1Q9NYA1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPHK1Q9NYA1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.16■□□□□ 0.82
SPHK1Q9NYA1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPHK1Q9NYA1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPHK1Q9NYA1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SPHK1Q9NYA1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPHK1Q9NYA1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.16■□□□□ 0.82
SPHK1Q9NYA1 AC007322.1-201ENST00000426983 750 ntBASIC20.16■□□□□ 0.82
SPHK1Q9NYA1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.16■□□□□ 0.82
SPHK1Q9NYA1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPHK1Q9NYA1 AC231657.2-201ENST00000624556 255 ntBASIC20.16■□□□□ 0.82
SPHK1Q9NYA1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
SPHK1Q9NYA1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPHK1Q9NYA1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SPHK1Q9NYA1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPHK1Q9NYA1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPHK1Q9NYA1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPHK1Q9NYA1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SPHK1Q9NYA1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPHK1Q9NYA1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.15■□□□□ 0.82
SPHK1Q9NYA1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPHK1Q9NYA1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SPHK1Q9NYA1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPHK1Q9NYA1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPHK1Q9NYA1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.15■□□□□ 0.82
SPHK1Q9NYA1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.15■□□□□ 0.82
SPHK1Q9NYA1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.15■□□□□ 0.82
SPHK1Q9NYA1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.15■□□□□ 0.82
SPHK1Q9NYA1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPHK1Q9NYA1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
SPHK1Q9NYA1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
SPHK1Q9NYA1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPHK1Q9NYA1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.15■□□□□ 0.82
SPHK1Q9NYA1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.15■□□□□ 0.82
SPHK1Q9NYA1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPHK1Q9NYA1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPHK1Q9NYA1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
SPHK1Q9NYA1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.14■□□□□ 0.82
SPHK1Q9NYA1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
SPHK1Q9NYA1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SPHK1Q9NYA1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
SPHK1Q9NYA1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SPHK1Q9NYA1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.14■□□□□ 0.81
SPHK1Q9NYA1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPHK1Q9NYA1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPHK1Q9NYA1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.14■□□□□ 0.81
SPHK1Q9NYA1 MIR663A-201ENST00000385250 93 ntBASIC20.14■□□□□ 0.81
SPHK1Q9NYA1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.14■□□□□ 0.81
SPHK1Q9NYA1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.14■□□□□ 0.81
SPHK1Q9NYA1 AC013268.1-206ENST00000638368 961 ntBASIC20.14■□□□□ 0.81
SPHK1Q9NYA1 AC112229.1-201ENST00000639295 961 ntBASIC20.14■□□□□ 0.81
SPHK1Q9NYA1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.14■□□□□ 0.81
SPHK1Q9NYA1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.14■□□□□ 0.81
SPHK1Q9NYA1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SPHK1Q9NYA1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms